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L2_026_000M1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_357_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(200..1885)
DNA (1686bp) protein (562aa)
DAK2 domain fusion protein YloV n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR2_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EFB76360.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DAK2 domain fusion protein YloV
L2_026_000M1_scaffold_357_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1925..2278)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76361.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_357_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2498..2944
DNA (447bp) protein (149aa)
CBS domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR4_9FIRM
CBS domain protein {ECO:0000313|EMBL:EFB76362.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
CBS domain.
L2_026_000M1_scaffold_357_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3316..6510)
DNA (3195bp) protein (1065aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77399.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
GLUG domain-containing protein
L2_026_000M1_scaffold_357_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6507..9047)
DNA (2541bp) protein (847aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77398.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RND family transporter
L2_026_000M1_scaffold_357_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9243..9617)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR5_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L12P
L2_026_000M1_scaffold_357_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9710..10222)
DNA (513bp) protein (171aa)
50S ribosomal protein L10 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR6_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L10P
L2_026_000M1_scaffold_357_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10467..11159)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR7_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L1P
L2_026_000M1_scaffold_357_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11178..11603)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR8_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L11P
L2_026_000M1_scaffold_357_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11755..12294)
DNA (540bp) protein (180aa)
Transcription termination/antitermination protein NusG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLR9_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcription antitermination protein nusG
L2_026_000M1_scaffold_357_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12319..12612)
DNA (294bp) protein (98aa)
Protein translocase subunit SecE n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS0_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
preprotein translocase, SecE subunit, bacterial
L2_026_000M1_scaffold_357_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12629..12778)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS1_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L33P
L2_026_000M1_scaffold_357_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12997..13872)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76985.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_357_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13958..14140
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76984.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_357_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14303..15118)
DNA (816bp) protein (272aa)
predicted 23S rRNA m(1)G methyltransferase (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN5_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EFB76983.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_357_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15115..15732)
DNA (618bp) protein (206aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76982.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_357_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15750..17039)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76981.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Protein of unknown function (DUF1015).
L2_026_000M1_scaffold_357_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17059..17712)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76980.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
L2_026_000M1_scaffold_357_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17693..19081)
DNA (1389bp) protein (463aa)
Na(+)-translocating NADH-quinone reductase subunit D domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM
Na(+)-translocating NADH-quinone reductase subunit D domain protein {ECO:0000313|EMBL:EFB76979.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
L2_026_000M1_scaffold_357_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19056..20075)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76978.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
L2_026_000M1_scaffold_357_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20091..20744)
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM9_9FIRM
L2_026_000M1_scaffold_357_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21035..21970)
DNA (936bp) protein (312aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76974.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76974.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM6_9FIRM
glycosyl transferase 2
L2_026_000M1_scaffold_357_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21995..24397)
DNA (2403bp) protein (801aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76973.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_357_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24744..26045)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76972.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_357_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26076..27128)
DNA (1053bp) protein (351aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76971.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76971.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM3_9FIRM
group 1 glycosyl transferase
L2_026_000M1_scaffold_357_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27125..28279)
DNA (1155bp) protein (385aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76970.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76970.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM2_9FIRM
group 1 glycosyl transferase
L2_026_000M1_scaffold_357_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28313..29725)
DNA (1413bp) protein (471aa)
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EFB76969.1}; EC=2.7.8.- {ECO:0000313|EMBL:EFB76969.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM1_9FIRM
undecaprenyl-phosphate glucose phosphotransferase
L2_026_000M1_scaffold_357_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29981..30976)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76968.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted transcriptional regulator
L2_026_000M1_scaffold_357_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31098..31985)
DNA (888bp) protein (296aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJK6_9FIRM
yjeF C-terminal region, hydroxyethylthiazole kinase-related
L2_026_000M1_scaffold_357_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32062..32799
DNA (738bp) protein (246aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJK5_9FIRM
Displaying items 1-30 of 46 in total

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