ggKbase home page

L2_026_000M1_scaffold_376

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_376_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
Transketolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1J4_9BACT
Transketolase {ECO:0000313|EMBL:CDD24342.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transketolase
L2_026_000M1_scaffold_376_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(179..1456)
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=3 Tax=Alistipes RepID=I3YII8_ALIFI
endopeptidase Clp ATP-binding regulatory subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_376_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1456..2124)
DNA (669bp) protein (223aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Alistipes RepID=I3YII9_ALIFI
protease subunit of ATP-dependent protease
L2_026_000M1_scaffold_376_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2357..3682)
DNA (1326bp) protein (442aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) n=2 Tax=Alistipes RepID=I3YIJ0_ALIFI
FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) {ECO:0000313|EMBL:AFL76808.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_376_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4012..4803
DNA (792bp) protein (264aa)
Glutamine cyclotransferase n=2 Tax=Alistipes RepID=I3YIJ1_ALIFI
glutamine cyclotransferase
Glutamine cyclotransferase {ECO:0000313|EMBL:AFL76809.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_376_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4804..8415
DNA (3612bp) protein (1204aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EFR57455.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EFR57455.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
methionine synthase (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Alistipes sp. HGB5 RepID=E4MC87_9BACT
L2_026_000M1_scaffold_376_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8474..9439
DNA (966bp) protein (322aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Methylenetetrahydrofolate reductase n=2 Tax=Alistipes RepID=I3YIJ3_ALIFI
L2_026_000M1_scaffold_376_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9445..10557
DNA (1113bp) protein (371aa)
Amidohydrolase n=1 Tax=Alistipes sp. HGB5 RepID=E4MC85_9BACT
Amidohydrolase {ECO:0000313|EMBL:EFR57574.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
amidohydrolase
L2_026_000M1_scaffold_376_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10554..12785
DNA (2232bp) protein (744aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Alistipes sp. HGB5 RepID=E4MC84_9BACT
L2_026_000M1_scaffold_376_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12789..13919
DNA (1131bp) protein (377aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Putative menaquinone biosynthesis protein, SCO4550 family n=1 Tax=Alistipes sp. HGB5 RepID=E4MC83_9BACT
de-hypoxanthine futalosine cyclase
L2_026_000M1_scaffold_376_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14363..16303)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MC81_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57553.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glycoside hydrolase
L2_026_000M1_scaffold_376_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16373..17935)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MC80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76729.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_026_000M1_scaffold_376_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17964..19154)
DNA (1191bp) protein (397aa)
Glycosyl hydrolase family 76 n=1 Tax=Alistipes sp. HGB5 RepID=E4MC79_9BACT
Glycosyl hydrolase family 76 {ECO:0000313|EMBL:EFR57479.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glycosyl hydrolase
L2_026_000M1_scaffold_376_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19165..19875)
DNA (711bp) protein (237aa)
GDSL-like protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MC78_9BACT
GDSL-like protein {ECO:0000313|EMBL:EFR57489.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
lysophospholipase L1-like esterase
L2_026_000M1_scaffold_376_15
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20161..24219
DNA (4059bp) protein (1353aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MC76_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFR57487.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
signal transduction histidine kinase
L2_026_000M1_scaffold_376_16
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24519..25730)
DNA (1212bp) protein (404aa)
Glycosyl hydrolase family 76 n=2 Tax=Alistipes RepID=E4MC75_9BACT
Glycosyl hydrolase family 76 {ECO:0000313|EMBL:CCZ76725.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
glycosyl hydrolase
L2_026_000M1_scaffold_376_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25795..27936)
DNA (2142bp) protein (714aa)
Putative lipoprotein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5ULY3_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CCZ76724.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_026_000M1_scaffold_376_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27952..29076)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MC73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57469.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_026_000M1_scaffold_376_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29104..30756)
DNA (1653bp) protein (551aa)
SusD family protein n=2 Tax=Alistipes RepID=E4MC72_9BACT
SusD family protein {ECO:0000313|EMBL:CCZ76722.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RagB/SusD family protein
L2_026_000M1_scaffold_376_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30772..33903)
DNA (3132bp) protein (1044aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Alistipes RepID=E4MC71_9BACT
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ76721.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
SusC/RagA family TonB-linked outer membrane protein
L2_026_000M1_scaffold_376_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34389..37595)
DNA (3207bp) protein (1069aa)
Glycosyl hydrolase family 38 C-terminal domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MC70_9BACT
Glycosyl hydrolase family 38 C-terminal domain protein {ECO:0000313|EMBL:EFR57558.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
alpha-mannosidase
L2_026_000M1_scaffold_376_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37783..38238)
DNA (456bp) protein (152aa)
ATP synthase subunit C n=3 Tax=Alistipes RepID=I3YIK8_ALIFI
ATP synthase subunit C
ATP synthase subunit C {ECO:0000313|EMBL:CCZ76276.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_376_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38260..40107)
DNA (1848bp) protein (616aa)
Archaeal/vacuolar-type H+-ATPase subunit I n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIK9_ALIFI
Archaeal/vacuolar-type H+-ATPase subunit I {ECO:0000313|EMBL:AFL76827.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
archaeal/vacuolar-type H+-ATPase subunit I
L2_026_000M1_scaffold_376_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40104..40712)
DNA (609bp) protein (203aa)
Archaeal/vacuolar-type H+-ATPase subunit D n=3 Tax=Alistipes RepID=I3YIL0_ALIFI
archaeal/vacuolar-type H+-ATPase subunit D
Archaeal/vacuolar-type H+-ATPase subunit D {ECO:0000313|EMBL:CCZ76278.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_376_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40719..42041)
DNA (1323bp) protein (441aa)
Archaeal/vacuolar-type H+-ATPase subunit B n=3 Tax=Alistipes RepID=I3YIL1_ALIFI
archaeal/vacuolar-type H+-ATPase subunit B
ATP synthase alpha/beta family, nucleotide-binding domain protein {ECO:0000313|EMBL:EFR57585.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_026_000M1_scaffold_376_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42052..43806)
DNA (1755bp) protein (585aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Archaeal/vacuolar-type H+-ATPase subunit A n=3 Tax=Alistipes RepID=I3YIL2_ALIFI
archaeal/vacuolar-type H+-ATPase subunit A
L2_026_000M1_scaffold_376_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43945..44778)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MC64_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76281.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_026_000M1_scaffold_376_28
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44784..45398)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIL4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76832.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_376_29
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45743..46948)
DNA (1206bp) protein (402aa)
Transcriptional regulator/sugar kinase n=3 Tax=Alistipes RepID=I3YIL5_ALIFI
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:AFL76833.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying 29 items

View Taxonomy