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L2_026_000M1_scaffold_417

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_417_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..777)
DNA (777bp) protein (259aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6H5_9FIRM
L2_026_000M1_scaffold_417_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(942..1103)
DNA (162bp) protein (54aa)
FeoB family ferrous iron (Fe2+) uptake protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHX3_9FIRM
FeoB family ferrous iron (Fe2+) uptake protein {ECO:0000313|EMBL:CDB44931.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_417_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1323..1979)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44932.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2237..7567)
DNA (5331bp) protein (1777aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I428_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44933.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
outer membrane autotransporter
L2_026_000M1_scaffold_417_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7946..8254)
DNA (309bp) protein (103aa)
Putative membrane protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEC9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB44934.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8295..9737)
DNA (1443bp) protein (481aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3S8_9FIRM
glutamyl-tRNA(Gln) amidotransferase subunit B
L2_026_000M1_scaffold_417_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9737..11203)
DNA (1467bp) protein (489aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I434_9FIRM
glutamyl-tRNA(Gln) amidotransferase subunit A
L2_026_000M1_scaffold_417_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11221..11508)
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IED5_9FIRM
glutamyl-tRNA(Gln) amidotransferase subunit C
L2_026_000M1_scaffold_417_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11790..12293
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44940.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
conserved protein of DIM6/NTAB family
L2_026_000M1_scaffold_417_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12367..14427)
DNA (2061bp) protein (687aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHY9_9FIRM
L2_026_000M1_scaffold_417_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14568..16796)
DNA (2229bp) protein (743aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3T4_9FIRM
ATP-dependent DNA helicase PcrA
L2_026_000M1_scaffold_417_12
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16947..17351)
DNA (405bp) protein (135aa)
very short patch repair endonuclease (EC:3.1.-.-)
DNA mismatch endonuclease Vsr n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WI17_9FIRM
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:CDD10763.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L2_026_000M1_scaffold_417_13
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17368..18429)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z623_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL84691.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
L2_026_000M1_scaffold_417_14
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18432..19877)
DNA (1446bp) protein (482aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridium sp. CAG:264 RepID=R5K5N3_9CLOT
DNA-methyltransferase Dcm
L2_026_000M1_scaffold_417_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19999..20382)
DNA (384bp) protein (128aa)
Mutator MutT protein/thiamine-phosphate pyrophosphorylase family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I440_9FIRM
Mutator MutT protein/thiamine-phosphate pyrophosphorylase family protein {ECO:0000313|EMBL:CDB44943.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20494..23811)
DNA (3318bp) protein (1106aa)
Autotransporter n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEE1_9FIRM
Autotransporter {ECO:0000313|EMBL:CDB44944.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24218..26707)
DNA (2490bp) protein (830aa)
Bacterial regulatory s luxR family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6J2_9FIRM
Bacterial regulatory s luxR family protein {ECO:0000313|EMBL:CDB44945.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ATP-dependent transcriptional regulator
L2_026_000M1_scaffold_417_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27145..27357
DNA (213bp) protein (71aa)
Cold shock-like protein CspG n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHZ5_9FIRM
Cold shock-like protein CspG {ECO:0000313|EMBL:CDB44946.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
cold-shock DNA-binding protein family
L2_026_000M1_scaffold_417_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27555..28346
DNA (792bp) protein (264aa)
Putative tRNA(Ile)-lysidine synthetase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3T9_9FIRM
Putative tRNA(Ile)-lysidine synthetase {ECO:0000313|EMBL:CDB44947.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28440..28811
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I445_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44948.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29014..29226)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44951.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_417_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29277..29498)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44952.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_417_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29504..30133)
DNA (630bp) protein (210aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I452_9FIRM
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:CDB44953.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
N-acetylmuramoyl-L-alanine amidase family 2
L2_026_000M1_scaffold_417_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30430..33255
DNA (2826bp) protein (942aa)
Putative signal transduction histidine kinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEF4_9FIRM
Putative signal transduction histidine kinase {ECO:0000313|EMBL:CDB44954.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative signal transduction histidine kinase
L2_026_000M1_scaffold_417_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33312..34172)
DNA (861bp) protein (287aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6K5_9FIRM
L2_026_000M1_scaffold_417_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

34432..35088
DNA (657bp) protein (219aa)
SNARE-like domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II07_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:CDB44956.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
dedA; hypothetical protein
L2_026_000M1_scaffold_417_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

35104..36138
DNA (1035bp) protein (345aa)
L-threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3V2_9FIRM
Beta-eliminating lyase {ECO:0000313|EMBL:CDB44957.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_417_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(36192..38321)
DNA (2130bp) protein (710aa)
GGDEF domain-containing protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I459_9FIRM
GGDEF domain-containing protein {ECO:0000313|EMBL:CDB44958.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
response regulator receiver:Metal-dependent phosphohydrolase
L2_026_000M1_scaffold_417_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(38466..39662)
DNA (1197bp) protein (399aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEG0_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:CDB44959.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
threonyl/alanyl tRNA synthetase SAD
L2_026_000M1_scaffold_417_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

40042..40692
DNA (651bp) protein (217aa)
HAD-superfamily hydrolase (EC:3.1.3.5)
Haloacid dehalogenase-like hydrolase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6L1_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CDB44960.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Displaying items 1-30 of 33 in total

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