ggKbase home page

L2_026_000M1_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_463_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(200..1780)
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H938_9FIRM
L2_026_000M1_scaffold_463_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1928..2887)
DNA (960bp) protein (320aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9B2_9FIRM
L2_026_000M1_scaffold_463_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3041..4222)
DNA (1182bp) protein (394aa)
Transporter CPA2 family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCH5_9FIRM
Transporter CPA2 family {ECO:0000313|EMBL:CDE35897.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L2_026_000M1_scaffold_463_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4544..5164)
DNA (621bp) protein (207aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAC1_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDE35898.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_463_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5172..6152)
DNA (981bp) protein (327aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8A8_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CDE35899.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_026_000M1_scaffold_463_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6258..7541)
DNA (1284bp) protein (428aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H942_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDE35900.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
diguanylate cyclase (GGDEF) domain
L2_026_000M1_scaffold_463_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7623..8783)
DNA (1161bp) protein (387aa)
Myo-inositol 2-dehydrogenase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9B5_9FIRM
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:CDE35901.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
myo-inositol 2-dehydrogenase
L2_026_000M1_scaffold_463_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8831..9928)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35902.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_463_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10338..10847)
DNA (510bp) protein (170aa)
Isochorismatase hydrolase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H922_9FIRM
Isochorismatase hydrolase {ECO:0000313|EMBL:CDE35791.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
isochorismatase hydrolase
L2_026_000M1_scaffold_463_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11064..12344)
DNA (1281bp) protein (427aa)
Seryl-tRNA synthetase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8V1_9FIRM
Seryl-tRNA synthetase {ECO:0000313|EMBL:CDE35790.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
seryl-tRNA synthetase
L2_026_000M1_scaffold_463_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12437..13000)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H813_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35789.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_463_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13047..13967)
DNA (921bp) protein (307aa)
Chromosome partitioning protein ParB family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA36_9FIRM
Chromosome partitioning protein ParB family {ECO:0000313|EMBL:CDE35788.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ParB family chromosome partitioning protein
L2_026_000M1_scaffold_463_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13968..14741)
DNA (774bp) protein (258aa)
Chromosome partitioning protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC79_9FIRM
Chromosome partitioning protein {ECO:0000313|EMBL:CDE35787.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
chromosome partitioning protein
L2_026_000M1_scaffold_463_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15293..15937)
DNA (645bp) protein (215aa)
Two-component system NarL family response regulator DegU n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCJ2_9FIRM
Two-component system NarL family response regulator DegU {ECO:0000313|EMBL:CDE37051.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system NarL family response regulator DegU
L2_026_000M1_scaffold_463_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15956..16975)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37052.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system NarL family sensor histidine kinase DegS
L2_026_000M1_scaffold_463_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17261..18220
DNA (960bp) protein (320aa)
Haloalkane dehalogenase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDK4_9FIRM
Haloalkane dehalogenase {ECO:0000313|EMBL:CDE37053.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
haloalkane dehalogenase
L2_026_000M1_scaffold_463_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18434..19150)
DNA (717bp) protein (239aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBM2_9FIRM
glucose inhibited division protein B
L2_026_000M1_scaffold_463_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19186..21069)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCD1_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
L2_026_000M1_scaffold_463_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21121..22494)
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tRNA modification GTPase MnmE n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCJ7_9FIRM
tRNA modification GTPase
L2_026_000M1_scaffold_463_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22562..23317)
DNA (756bp) protein (252aa)
SpoIIIJ-associated protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFR2_9FIRM
SpoIIIJ-associated protein {ECO:0000313|EMBL:CDE37057.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
single stranded nucleic acid binding protein
L2_026_000M1_scaffold_463_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23348..24607)
DNA (1260bp) protein (420aa)
Preprotein translocase YidC subunit n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDL1_9FIRM
Preprotein translocase YidC subunit {ECO:0000313|EMBL:CDE37058.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
preprotein translocase YidC subunit
L2_026_000M1_scaffold_463_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24625..24867)
DNA (243bp) protein (81aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBM7_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_463_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24848..25222)
DNA (375bp) protein (125aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribonuclease P protein component n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCD7_9FIRM
ribonuclease P protein component
L2_026_000M1_scaffold_463_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25445..25579)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCK2_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
LSU ribosomal protein L34P
L2_026_000M1_scaffold_463_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26000..27352
DNA (1353bp) protein (451aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFR6_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
chromosomal replication initiator protein DnaA
L2_026_000M1_scaffold_463_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27665..28771
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA polymerase III subunit beta n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDL5_9FIRM
DNA polymerase
L2_026_000M1_scaffold_463_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28788..28997
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37064.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_463_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29013..30110
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCE1_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA replication and repair protein RecF
L2_026_000M1_scaffold_463_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30143..32065
DNA (1923bp) protein (641aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA gyrase subunit B n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCK7_9FIRM
DNA gyrase subunit B
L2_026_000M1_scaffold_463_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32152..34662
DNA (2511bp) protein (837aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA gyrase subunit A n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFS2_9FIRM
DNA gyrase subunit A
Displaying items 1-30 of 37 in total

View Taxonomy