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L2_026_000M1_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_475_1
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123..1010)
DNA (888bp) protein (296aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZP9_9PROT
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:CDB39749.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
UTP--glucose-1-phosphate uridylyltransferase
L2_026_000M1_scaffold_475_2
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1122..5366)
DNA (4245bp) protein (1415aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRR5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39750.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L2_026_000M1_scaffold_475_3
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5481..5882
DNA (402bp) protein (134aa)
Cytidine deaminase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2W1_9PROT
Cytidine deaminase {ECO:0000313|EMBL:CDB39751.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
cytidine deaminase
L2_026_000M1_scaffold_475_4
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5879..6685
DNA (807bp) protein (269aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
Purine nucleoside phosphorylase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP22_9PROT
purine nucleoside phosphorylase
L2_026_000M1_scaffold_475_5
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6687..7421
DNA (735bp) protein (245aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Azospirillum sp. CAG:260 PF1_9PROT">RepID=R6HPF1_9PROT
L2_026_000M1_scaffold_475_6
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7424..8737
DNA (1314bp) protein (438aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
Thymidine phosphorylase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZQ4_9PROT
deoA; thymidine phosphorylase
L2_026_000M1_scaffold_475_7
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8895..10487
DNA (1593bp) protein (531aa)
Putative transmembrane sulphatase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRS2_9PROT
Putative transmembrane sulphatase {ECO:0000313|EMBL:CDB39755.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L2_026_000M1_scaffold_475_8
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10539..11732
DNA (1194bp) protein (398aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2W6_9PROT
L2_026_000M1_scaffold_475_9
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11729..12487
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP29_9PROT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L2_026_000M1_scaffold_475_10
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12552..13718
DNA (1167bp) protein (389aa)
DnaJ-like protein DjlA putative n=1 Tax=Azospirillum sp. CAG:260 PF5_9PROT">RepID=R6HPF5_9PROT
DnaJ-like protein DjlA putative {ECO:0000313|EMBL:CDB39758.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
heat shock protein DnaJ domain-containing protein
L2_026_000M1_scaffold_475_11
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13880..15244
DNA (1365bp) protein (455aa)
Radical SAM domain protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZQ7_9PROT
Radical SAM domain protein {ECO:0000313|EMBL:CDB39759.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
radical SAM protein
L2_026_000M1_scaffold_475_12
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15216..15947
DNA (732bp) protein (244aa)
N-acetylmuramyl-L-alanine amidase negative regulator of AmpC AmpD n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRS7_9PROT
N-acetylmuramyl-L-alanine amidase negative regulator of AmpC AmpD {ECO:0000313|EMBL:CDB39760.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
L2_026_000M1_scaffold_475_13
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15944..16228
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HPG2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39763.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_475_14
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16548..17006)
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
putative Holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRT2_9PROT
L2_026_000M1_scaffold_475_15
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17166..18470
DNA (1305bp) protein (435aa)
Protein TolB n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2X4_9PROT
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
tolB; translocation protein TolB
L2_026_000M1_scaffold_475_16
unknown

Not on your lists

comp(18467..18652)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_026_000M1_scaffold_475_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(19016..19456)
DNA (441bp) protein (147aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBT9_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CCY26988.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_026_000M1_scaffold_475_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19639..19908)
DNA (270bp) protein (90aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPC0_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL42655.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_026_000M1_scaffold_475_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(19902..20249)
DNA (348bp) protein (116aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBT9_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CCY26988.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_026_000M1_scaffold_475_20
unknown

Not on your lists

comp(20388..20546)
DNA (159bp) protein (53aa)

This feature has no annotations

L2_026_000M1_scaffold_475_21
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21534..21950)
DNA (417bp) protein (139aa)
DNA mismatch endonuclease Vsr n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KI01_9FIRM
DNA mismatch endonuclease Vsr
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:AGL02838.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L2_026_000M1_scaffold_475_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21940..23562)
DNA (1623bp) protein (541aa)
Cytosine-specific methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBC2_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EGJ47650.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA-cytosine methyltransferase
L2_026_000M1_scaffold_475_23
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23577..25658)
DNA (2082bp) protein (694aa)
AIPR protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBR0_9FIRM
AIPR protein {ECO:0000313|EMBL:CDC33260.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_026_000M1_scaffold_475_24
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25670..26590)
DNA (921bp) protein (307aa)
PF14390 domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QR15_9FIRM
PF14390 domain protein {ECO:0000313|EMBL:CDC33261.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_026_000M1_scaffold_475_25
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26577..29372)
DNA (2796bp) protein (932aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MP62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72583.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Z1 domain-containing protein
L2_026_000M1_scaffold_475_26
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29365..30831)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33264.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
putative ATPase
L2_026_000M1_scaffold_475_27
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30885..31088)
DNA (204bp) protein (68aa)
Cro/Cl family transcriptional regulator n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B47ED1
Uncharacterized protein {ECO:0000313|EMBL:EQB22151.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
XRE family transcriptional regulator
L2_026_000M1_scaffold_475_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31494..31835)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45534.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_026_000M1_scaffold_475_29
unknown

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comp(31832..31990)
DNA (159bp) protein (53aa)

This feature has no annotations

L2_026_000M1_scaffold_475_30
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32610..32924
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67481.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Helix-turn-helix.
Displaying items 1-30 of 38 in total

View Taxonomy