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L2_026_000M1_scaffold_509

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_509_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..232
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZC19_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08936.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_509_2
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


370..522
DNA (153bp) protein (51aa)
50S ribosomal protein L34 n=18 Tax=Bacteroidales RepID=A7AE63_9PORP
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
50S ribosomal protein L34
L2_026_000M1_scaffold_509_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

643..1275
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZZT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08938.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_509_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1278..2357
DNA (1080bp) protein (360aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Pseudouridine synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0B9_9PORP
ribosomal large subunit pseudouridine synthase D
L2_026_000M1_scaffold_509_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2361..3338
DNA (978bp) protein (326aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCL9_9PORP
L2_026_000M1_scaffold_509_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3398..4555
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZC23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08941.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_509_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4664..8632)
DNA (3969bp) protein (1323aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y6Y0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08942.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
two-component system sensor histidine kinase/response regulator
L2_026_000M1_scaffold_509_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8855..10087
DNA (1233bp) protein (411aa)
Nucleoside transporter n=2 Tax=Parabacteroides merdae RepID=K5ZZU0_9PORP
Nucleoside transporter {ECO:0000313|EMBL:EKN08943.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
major facilitator transporter
L2_026_000M1_scaffold_509_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10711..11919
DNA (1209bp) protein (403aa)
Ornithine-oxo-acid transaminase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0C2_9PORP
Ornithine-oxo-acid transaminase {ECO:0000313|EMBL:EKN08944.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
acetylornithine aminotransferase
L2_026_000M1_scaffold_509_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11926..12822
DNA (897bp) protein (299aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Arginase n=2 Tax=Parabacteroides merdae RepID=A7AE72_9PORP
arginase
L2_026_000M1_scaffold_509_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12801..12911)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJE5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11258.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_026_000M1_scaffold_509_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12927..15230)
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZC26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08946.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_509_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15227..19855)
DNA (4629bp) protein (1543aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y6Y3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08947.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_509_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20030..20818
DNA (789bp) protein (263aa)
Inositol monophosphatase family protein n=3 Tax=Parabacteroides merdae RepID=A7AE76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08948.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
inositol-1-monophosphatase
L2_026_000M1_scaffold_509_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20839..21027)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0C7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08949.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_509_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21325..22863)
DNA (1539bp) protein (513aa)
Bacterial group 2 Ig-like protein n=2 Tax=Parabacteroides merdae RepID=A7AE79_9PORP
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EDN86916.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative lipoprotein
L2_026_000M1_scaffold_509_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22889..25630)
DNA (2742bp) protein (914aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZTM4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08951.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-dependent receptor
L2_026_000M1_scaffold_509_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25704..26081
DNA (378bp) protein (126aa)
Thioesterase family protein n=4 Tax=Parabacteroides RepID=A7AE80_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08952.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Thioesterase superfamily
L2_026_000M1_scaffold_509_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26222..27502
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Enolase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZZV0_9PORP
enolase
L2_026_000M1_scaffold_509_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27948..28079)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0D1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08954.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_509_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28279..30714
DNA (2436bp) protein (812aa)
TonB-dependent receptor n=2 Tax=Parabacteroides merdae RepID=A7AE83_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN86920.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent receptor
L2_026_000M1_scaffold_509_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30941..32146
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZTL9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08956.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_509_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32244..35603
DNA (3360bp) protein (1120aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B2L0_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN08957.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Outer membrane receptor proteins, mostly Fe transport
L2_026_000M1_scaffold_509_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35632..37590
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B3B4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08958.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ragB/SusD family protein
L2_026_000M1_scaffold_509_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37650..38186)
DNA (537bp) protein (179aa)
Sigma-70 region 2 n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7A9F6_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EDN88546.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative RNA polymerase ECF-type sigma factor
Displaying 25 items

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