ggKbase home page

L2_026_000M1_scaffold_517

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_517_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..3106
DNA (3105bp) protein (1035aa)
Translation initiation factor IF-2 n=2 Tax=Bacteroides caccae RepID=A5ZKL5_9BACE
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
bacterial translation initiation factor 2 (bIF-2)
L2_026_000M1_scaffold_517_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3185..3715
DNA (531bp) protein (177aa)
CvpA family protein n=3 Tax=Bacteroides RepID=A5ZKL6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74866.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_517_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3693..5147
DNA (1455bp) protein (485aa)
FeS assembly protein SufB n=3 Tax=Bacteroides RepID=A5ZKL7_9BACE
FeS assembly protein SufB {ECO:0000313|EMBL:EDM19349.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cysteine desulfurase
L2_026_000M1_scaffold_517_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5163..5915
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=2 Tax=Bacteroides RepID=I9PMA3_9BACE
FeS assembly ATPase SufC {ECO:0000313|EMBL:CCZ74868.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter ATP-binding protein
L2_026_000M1_scaffold_517_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5912..7261
DNA (1350bp) protein (450aa)
FeS assembly protein SufD n=2 Tax=Bacteroides caccae RepID=A5ZKL9_9BACE
FeS assembly protein SufD {ECO:0000313|EMBL:EIY17625.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter permease
L2_026_000M1_scaffold_517_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7278..8489
DNA (1212bp) protein (404aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Cysteine desulfurase SufS subfamily n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UA17_9BACE
cysteine desulfurase
L2_026_000M1_scaffold_517_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8774..9100
DNA (327bp) protein (109aa)
UPF0145 protein BACCAC_03467 n=3 Tax=Bacteroides RepID=A5ZKM1_9BACE
UPF0145 protein BN535_01090 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_517_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9174..10676)
DNA (1503bp) protein (501aa)
Arylsulfatase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V1P1_9BACE
Arylsulfatase {ECO:0000313|EMBL:CCZ74872.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
sulfatase
L2_026_000M1_scaffold_517_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10703..12652)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PM97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17621.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_517_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12670..16086)
DNA (3417bp) protein (1139aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UTV3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY17620.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_517_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16224..17309)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECE9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17619.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative regulatory protein
L2_026_000M1_scaffold_517_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17371..18012)
DNA (642bp) protein (214aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PMR8_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EIY17618.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNA polymerase sigma 70
L2_026_000M1_scaffold_517_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18214..19113)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V1P4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74877.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_517_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19186..21759)
DNA (2574bp) protein (858aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PM93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17616.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_517_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21944..24133)
DNA (2190bp) protein (730aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UTU6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17615.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000M1_scaffold_517_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24664..26868
DNA (2205bp) protein (735aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=2 Tax=Bacteroides caccae RepID=A5ZKN0_9BACE
L2_026_000M1_scaffold_517_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26961..27563
DNA (603bp) protein (201aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Bacteroides RepID=A5ZKN1_9BACE
L2_026_000M1_scaffold_517_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27745..29286
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UX66_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17612.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_517_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29402..30382)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PMQ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74891.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Mg2+/Co2+ transporter
L2_026_000M1_scaffold_517_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30548..33031)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZKN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19366.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
thiol:disulfide interchange protein
L2_026_000M1_scaffold_517_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33206..34720
DNA (1515bp) protein (505aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Bacteroides caccae RepID=A5ZKN5_9BACE
L2_026_000M1_scaffold_517_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34784..35365
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74895.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Protein of unknown function (DUF3109).
L2_026_000M1_scaffold_517_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35371..35562)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ECD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17599.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000M1_scaffold_517_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35738..37696)
DNA (1959bp) protein (653aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=4 Tax=Bacteroides RepID=A5ZKN8_9BACE
L2_026_000M1_scaffold_517_25
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(37895..38149)
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=13 Tax=Bacteroides RepID=D6D030_9BACE
SSU ribosomal protein S20P
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Displaying 25 items

View Taxonomy