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L2_026_000M1_scaffold_525

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_525_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(173..1951)
DNA (1779bp) protein (593aa)
Signal peptide peptidase SppA, 67K type {ECO:0000313|EMBL:EFR56964.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR56964.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Signal peptide peptidase SppA, 67K type n=1 Tax=Alistipes sp. HGB5 RepID=E4MDP6_9BACT
signal peptide peptidase SppA, 67K type
L2_026_000M1_scaffold_525_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2128..3180
DNA (1053bp) protein (351aa)
ATPase involved in chromosome partitioning n=3 Tax=Alistipes RepID=I3YLG9_ALIFI
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CCZ75918.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_525_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3558..4499
DNA (942bp) protein (314aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UJM9_9BACT
L2_026_000M1_scaffold_525_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4509..6623
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MDP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56968.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
V8-like Glu-specific endopeptidase
L2_026_000M1_scaffold_525_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6773..8815
DNA (2043bp) protein (681aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Methionine--tRNA ligase n=2 Tax=Alistipes RepID=I3YLG6_ALIFI
hypothetical protein
L2_026_000M1_scaffold_525_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8853..9857
DNA (1005bp) protein (335aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EFR56948.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EFR56948.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Branched-chain-amino-acid transaminase n=1 Tax=Alistipes sp. HGB5 RepID=E4MDP0_9BACT
branched-chain amino acid aminotransferase
L2_026_000M1_scaffold_525_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10007..11890)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UCD4_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
glucose-inhibited division protein A
L2_026_000M1_scaffold_525_8
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11978..12613)
DNA (636bp) protein (212aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Endoribonuclease YbeY n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UJN3_9BACT
metalloprotein
L2_026_000M1_scaffold_525_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12626..13753)
DNA (1128bp) protein (376aa)
Peptidase, M23 family n=2 Tax=Alistipes RepID=E4MDN7_9BACT
Peptidase M23 family {ECO:0000313|EMBL:CCZ75925.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
membrane-bound metallopeptidase
L2_026_000M1_scaffold_525_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13767..15551)
DNA (1785bp) protein (595aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MDN6_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR56977.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_026_000M1_scaffold_525_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15563..16588)
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Alistipes sp. HGB5 RepID=E4MDN5_9BACT
L2_026_000M1_scaffold_525_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16661..18988
DNA (2328bp) protein (776aa)
Phospholipase, patatin family n=1 Tax=Alistipes sp. HGB5 RepID=E4MDN4_9BACT
Phospholipase, patatin family {ECO:0000313|EMBL:EFR56967.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
alpha/beta hydrolase fold protein
L2_026_000M1_scaffold_525_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19176..20438
DNA (1263bp) protein (421aa)
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Phosphoglycerate kinase n=3 Tax=Alistipes RepID=I3YLE8_ALIFI
L2_026_000M1_scaffold_525_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20561..22552
DNA (1992bp) protein (664aa)
Peptidase family M13 {ECO:0000313|EMBL:EFR56944.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFR56944.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Peptidase family M13 n=1 Tax=Alistipes sp. HGB5 RepID=E4MDN1_9BACT
metalloendopeptidase
L2_026_000M1_scaffold_525_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22790..23710
DNA (921bp) protein (307aa)
ABC-type uncharacterized transport system, ATPase component n=2 Tax=Alistipes RepID=I3YLE6_ALIFI
ABC transporter ATPase
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:AFL77814.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_525_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23723..25042
DNA (1320bp) protein (440aa)
ABC-2 type transporter n=2 Tax=Alistipes RepID=E4MDM9_9BACT
ABC-2 type transporter {ECO:0000313|EMBL:EFR56959.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Na+ efflux pump ABC transporter permease
L2_026_000M1_scaffold_525_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25252..27849
DNA (2598bp) protein (866aa)
Signal transduction histidine kinase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UJP3_9BACT
Signal transduction histidine kinase {ECO:0000313|EMBL:CCZ75934.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
signal transduction histidine kinase
L2_026_000M1_scaffold_525_18
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27852..29192
DNA (1341bp) protein (447aa)
Fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UD51_9BACT
Fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein {ECO:0000313|EMBL:CCZ75935.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L2_026_000M1_scaffold_525_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29207..29689)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YLE2_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77810.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_525_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29971..30444)
DNA (474bp) protein (158aa)
Transcriptional regulator n=3 Tax=Alistipes RepID=I3YLE1_ALIFI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFL77809.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_525_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30458..31645)
DNA (1188bp) protein (396aa)
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
2-amino-3-ketobutyrate coenzyme A ligase n=3 Tax=Alistipes RepID=I3YLE0_ALIFI
L2_026_000M1_scaffold_525_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32001..32603
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=1 Tax=Alistipes sp. HGB5 RepID=E4MDM2_9BACT
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFR56952.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L2_026_000M1_scaffold_525_23
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32600..33574
DNA (975bp) protein (325aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alistipes sp. HGB5 RepID=E4MDM1_9BACT
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFR56972.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Fe2+-dicitrate sensor, membrane component
L2_026_000M1_scaffold_525_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33700..37002
DNA (3303bp) protein (1101aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes sp. HGB5 RepID=E4MDL9_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFR56955.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Outer membrane receptor proteins, mostly Fe transport
L2_026_000M1_scaffold_525_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37016..38059
DNA (1044bp) protein (348aa)
SusD family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MDL8_9BACT
SusD family protein {ECO:0000313|EMBL:EFR56973.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
RagB/SusD domain-containing protein
Displaying 25 items

View Taxonomy