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L2_026_000M1_scaffold_560

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_560_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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747..3584
DNA (2838bp) protein (946aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMI2_9PORP
L2_026_000M1_scaffold_560_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3597..4475
DNA (879bp) protein (293aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15101.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transporter
L2_026_000M1_scaffold_560_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4560..5141
DNA (582bp) protein (194aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Non-canonical purine NTP pyrophosphatase n=4 Tax=Parabacteroides RepID=A7AGY7_9PORP
deoxyribonucleoside-triphosphatase
L2_026_000M1_scaffold_560_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5155..7485
DNA (2331bp) protein (777aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AAK2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12708.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
immunoreactive 84 kDa antigen PG93
L2_026_000M1_scaffold_560_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7561..8547)
DNA (987bp) protein (329aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Quinolinate synthase A n=2 Tax=Parabacteroides merdae RepID=K5YGJ8_9PORP
quinolinate synthetase
L2_026_000M1_scaffold_560_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8708..8851)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85601.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_560_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9301..9831
DNA (531bp) protein (177aa)
RNA methyltransferase, TrmH family n=4 Tax=Parabacteroides RepID=A7AGY3_9PORP
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDN85600.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tRNA/rRNA methyltransferase
L2_026_000M1_scaffold_560_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9823..10389)
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12704.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_560_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10524..10649
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15094.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_026_000M1_scaffold_560_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10671..11477
DNA (807bp) protein (269aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15093.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_560_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11490..13517
DNA (2028bp) protein (676aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85596.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_560_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13604..14383
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGX8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12700.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Fe-S oxidoreductase
L2_026_000M1_scaffold_560_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14457..17261)
DNA (2805bp) protein (935aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AGX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85594.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_560_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17426..17590
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMG5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12696.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_560_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17678..19354)
DNA (1677bp) protein (559aa)
Sulfate permease n=3 Tax=Parabacteroides merdae RepID=A7AGX4_9PORP
Sulfate permease {ECO:0000313|EMBL:EDN85591.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sulfate transporter permease
L2_026_000M1_scaffold_560_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19655..20233
DNA (579bp) protein (193aa)
Rubrerythrin n=4 Tax=Parabacteroides RepID=A7AGX3_9PORP
Rubrerythrin {ECO:0000313|EMBL:EKN12694.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rubrerythrin
L2_026_000M1_scaffold_560_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20398..21291
DNA (894bp) protein (298aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=A7AGX2_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN85589.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L2_026_000M1_scaffold_560_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21308..24580
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YGI3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12692.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
xanthan lyase XalB
L2_026_000M1_scaffold_560_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24594..26093
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12691.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
outer membrane lipoprotein silC
L2_026_000M1_scaffold_560_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26101..27153
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Parabacteroides RepID=A7AGW9_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD15082.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation efflux system outer membrane protein
L2_026_000M1_scaffold_560_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27150..30257
DNA (3108bp) protein (1036aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZAL9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12689.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AcrB/AcrD/AcrF family cation efflux protein
L2_026_000M1_scaffold_560_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30254..35092
DNA (4839bp) protein (1613aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AAI5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12688.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AcrB/AcrD/AcrF family cation efflux protein
L2_026_000M1_scaffold_560_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35176..35889
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGW6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85583.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
Displaying 23 items

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