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L2_026_000M1_scaffold_568

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_568_1
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(453..1196)
DNA (744bp) protein (248aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZSM8_9PROT
RNA 2'-O ribose methyltransferase substrate binding family protein
L2_026_000M1_scaffold_568_2
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(1193..3604)
DNA (2412bp) protein (804aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Ribonuclease R n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A771_9PROT
rnr; ribonuclease R
L2_026_000M1_scaffold_568_3
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(3949..4269)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AMV7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42462.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_568_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

4525..4782
DNA (258bp) protein (86aa)
Flavodoxin n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A148_9PROT
Flavodoxin {ECO:0000313|EMBL:CDA42464.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
flavodoxin
L2_026_000M1_scaffold_568_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5651..6178)
DNA (528bp) protein (176aa)
gpt; xanthine-guanine phosphoribosyltransferase (EC:2.4.2.22)
Phosphoribosyl transferase domain protein n=4 Tax=Proteobacteria RepID=D9Y6J0_9BURK
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:CCX88350.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_026_000M1_scaffold_568_6
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6191..7483)
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Adenylosuccinate synthetase n=3 Tax=Burkholderiales RepID=D9Y6I9_9BURK
Adenylosuccinate synthetase
L2_026_000M1_scaffold_568_7
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(7501..8667)
DNA (1167bp) protein (389aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZWF8_9PROT
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_568_8
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8679..8813)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Parasutterella RepID=F3QJ74_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX88344.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_026_000M1_scaffold_568_9
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(8889..9782)
DNA (894bp) protein (298aa)
Protein HflC n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4U6_9PROT
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
HflC protein
L2_026_000M1_scaffold_568_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(9793..11295)
DNA (1503bp) protein (501aa)
HflK protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZYG7_9PROT
HflK protein {ECO:0000313|EMBL:CDA43830.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hflK; hypothetical protein
L2_026_000M1_scaffold_568_11
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(11469..12632)
DNA (1164bp) protein (388aa)
GTPase HflX n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AB21_9PROT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
GTP-binding protein HflX
L2_026_000M1_scaffold_568_12
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12632..12883)
DNA (252bp) protein (84aa)
RNA-binding protein Hfq n=3 Tax=Proteobacteria RepID=D9Y6I4_9BURK
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
RNA chaperone Hfq
L2_026_000M1_scaffold_568_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(13203..14534)
DNA (1332bp) protein (444aa)
GTPase Der n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZWG5_9PROT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
GTP-binding protein Der
L2_026_000M1_scaffold_568_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(14540..15655)
DNA (1116bp) protein (372aa)
Outer membrane protein assembly factor BamB n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4V1_9PROT
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
yfgL; Outer membrane protein YfgL
L2_026_000M1_scaffold_568_15
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(15659..16294)
DNA (636bp) protein (212aa)
Tetratricopeptide repeat protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZYH3_9PROT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDA43835.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
membrane protein
L2_026_000M1_scaffold_568_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists


comp(16381..17658)
DNA (1278bp) protein (426aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Histidine--tRNA ligase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AB26_9PROT
histidyl-tRNA synthase
L2_026_000M1_scaffold_568_17
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(17658..18890)
DNA (1233bp) protein (411aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ARL4_9PROT
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L2_026_000M1_scaffold_568_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(18894..19988)
DNA (1095bp) protein (365aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZWH0_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA43838.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
XRE family transcriptional regulator
L2_026_000M1_scaffold_568_19
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(19981..21153)
DNA (1173bp) protein (391aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4V5_9PROT
radical SAM enzyme, Cfr family
L2_026_000M1_scaffold_568_20
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21223..21651)
DNA (429bp) protein (143aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=3 Tax=Proteobacteria RepID=D9Y6H6_9BURK
L2_026_000M1_scaffold_568_21
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(21828..22352)
DNA (525bp) protein (175aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AB32_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA43841.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_568_22
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(22363..22983)
DNA (621bp) protein (207aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ARL7_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA43842.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_568_23
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(23012..23551)
DNA (540bp) protein (180aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZWH5_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA43843.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_568_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(23557..25008)
DNA (1452bp) protein (484aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
rumA; 23S rRNA 5-methyluridine methyltransferase (EC:2.1.1.-)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4W1_9PROT
L2_026_000M1_scaffold_568_25
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(25029..25793)
DNA (765bp) protein (255aa)
Lipoprotein NlpD n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZYI5_9PROT
Lipoprotein NlpD {ECO:0000313|EMBL:CDA43845.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
peptidase M23B
L2_026_000M1_scaffold_568_26
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(25879..26631)
DNA (753bp) protein (251aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
5'-nucleotidase SurE n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AB38_9PROT
stationary phase survival protein SurE
L2_026_000M1_scaffold_568_27
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(26843..26995)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ARM3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA43847.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_568_28
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(27098..27874)
DNA (777bp) protein (259aa)
Radical SAM domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZWH9_9PROT
Radical SAM domain protein {ECO:0000313|EMBL:CDA43848.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Fe-S oxidoreductase
L2_026_000M1_scaffold_568_29
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28051..28476)
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family n=3 Tax=Burkholderiales RepID=D9Y6B7_9BURK
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EGG54026.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
MerR family transcriptional regulator
L2_026_000M1_scaffold_568_30
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28483..28839)
DNA (357bp) protein (119aa)
DNA-binding protein HU n=4 Tax=Proteobacteria RepID=D9Y6B6_9BURK
DNA-binding protein HU {ECO:0000313|EMBL:CCX87957.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
integration host factor subunit alpha
Displaying items 1-30 of 37 in total

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