ggKbase home page

L2_026_000M1_scaffold_630

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_630_1
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..354)
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH66_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50885.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
sulfatase
L2_026_000M1_scaffold_630_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(379..2550)
-----------------
DNA (2172bp)
protein (724aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:EFB77441.1}; EC=2.4.1.211 {ECO:0000313|EMBL:EFB77441.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIT2_9FIRM
conserved hypothetical protein TIGR02336
L2_026_000M1_scaffold_630_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(2599..3456)
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15623.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
binding-protein-dependent transport system inner membrane protein
L2_026_000M1_scaffold_630_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3472..4365)
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y0W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15624.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
binding-protein-dependent transport system inner membrane protein
L2_026_000M1_scaffold_630_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4505..5797)
-----------------
DNA (1293bp)
protein (431aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41322.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
extracellular solute-binding protein
L2_026_000M1_scaffold_630_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6096..6938
-----------------
DNA (843bp)
protein (281aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP56_9FIRM
AraC family transcriptional regulator {ECO:0000313|EMBL:KJF39400.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
AraC family transcriptional regulator
L2_026_000M1_scaffold_630_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7255..7617)
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SR19_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06414.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_026_000M1_scaffold_630_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7604..8002)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AJE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46817.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_026_000M1_scaffold_630_9

Not on your lists

comp(8128..9807)
-----------------
DNA (1680bp)
protein (560aa)
Membrane or secreted protein containing Peptidase M23 domain protein n=1 Tax=human gut metagenome RepID=K1SGQ0_9ZZZZ
Membrane or secreted protein containing Peptidase M23 domain protein {ECO:0000313|EMBL:EKC46536.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
peptidase M23
L2_026_000M1_scaffold_630_10

Not on your lists

comp(9788..10177)
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SXF1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC60004.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
conserved hypothetical protein
L2_026_000M1_scaffold_630_11

Not on your lists

comp(10268..10702)
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UKS8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC80849.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_630_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10708..13044)
-----------------
DNA (2337bp)
protein (779aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74626.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
TraE family protein
L2_026_000M1_scaffold_630_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13041..13322)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38942.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_630_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13375..14262)
-----------------
DNA (888bp)
protein (296aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KY28_OSCVS
Uncharacterized protein {ECO:0000313|EMBL:KJF38943.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_630_15
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14266..15120)
-----------------
DNA (855bp)
protein (285aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WS49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14139.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
Domain of unknown function (DUF1814).
L2_026_000M1_scaffold_630_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15117..15710)
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Z455_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15234.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
abortive phage infection protein
L2_026_000M1_scaffold_630_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15792..16124)
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UB83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38959.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
L2_026_000M1_scaffold_630_18
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16081..18333)
-----------------
DNA (2253bp)
protein (751aa)
Uncharacterized protein n=2 Tax=Dehalobacter RepID=K4L0T4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV04161.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L2_026_000M1_scaffold_630_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18379..21846)
-----------------
DNA (3468bp)
protein (1156aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UDM9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJF38945.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_630_20

Not on your lists

comp(21904..22254)
-----------------
DNA (351bp)
protein (117aa)
Plasmid stabilization system protein n=1 Tax=human gut metagenome RepID=K1SFK4_9ZZZZ
Plasmid stabilization system protein {ECO:0000313|EMBL:EKC56363.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Plasmid stabilisation system protein.
L2_026_000M1_scaffold_630_21

Not on your lists

comp(22251..22517)
-----------------
DNA (267bp)
protein (89aa)
Prevent-host-death family protein n=2 Tax=human gut metagenome RepID=K1S6R1_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EKC56362.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_630_22

Not on your lists

comp(22582..23301)
-----------------
DNA (720bp)
protein (240aa)
SCP-like extracellular (Fragment) n=1 Tax=human gut metagenome RepID=K1TAM8_9ZZZZ
SCP-like extracellular {ECO:0000313|EMBL:EKC56361.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
allergen V5/Tpx-1-like protein
L2_026_000M1_scaffold_630_23

Not on your lists

comp(23371..23652)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SGJ5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59762.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_630_24
unknown

Not on your lists

comp(23729..24058)
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

L2_026_000M1_scaffold_630_25

Not on your lists

comp(24235..24879)
-----------------
DNA (645bp)
protein (215aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SE30_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC51905.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_630_26

Not on your lists

comp(24872..25372)
-----------------
DNA (501bp)
protein (167aa)
ECF subfamily RNA polymerase sigma-24 factor (Fragment) n=1 Tax=human gut metagenome RepID=K1S915_9ZZZZ
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EKC51904.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_630_27
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25611..26255
-----------------
DNA (645bp)
protein (215aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JWC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY53147.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
hypothetical protein
L2_026_000M1_scaffold_630_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26417..27751
-----------------
DNA (1335bp)
protein (445aa)
Major Facilitator Superfamily n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5F5_9FIRM
Major Facilitator Superfamily {ECO:0000313|EMBL:CDE46493.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Major Facilitator Superfamily.
L2_026_000M1_scaffold_630_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27821..28423)
-----------------
DNA (603bp)
protein (201aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76384.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
HD domain.
L2_026_000M1_scaffold_630_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28431..28652)
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76383.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying items 1-30 of 51 in total

View Taxonomy