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L2_026_000M1_scaffold_667

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_667_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(155..1366)
DNA (1212bp) protein (404aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TLV2_9FIRM
nicotinate phosphoribosyltransferase
L2_026_000M1_scaffold_667_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1632..5435)
DNA (3804bp) protein (1268aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CBK93522.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CBK93522.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIS5_9FIRM
L2_026_000M1_scaffold_667_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5688..6578
DNA (891bp) protein (297aa)
Transcriptional regulatory protein, LysR family n=2 Tax=Eubacterium RepID=C4Z949_EUBR3
LysR family transcriptional regulator
Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:ACR75271.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6549..8924)
DNA (2376bp) protein (792aa)
Putative ATP-dependent DNA-repair helicase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGI6_9FIRM
putative ATP-dependent DNA-repair helicase
Putative ATP-dependent DNA-repair helicase {ECO:0000313|EMBL:ACR75270.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9072..9305)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TLU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75269.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9582..10487)
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIS9_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBK93526.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_667_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10580..11341)
DNA (762bp) protein (254aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribonuclease HII n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z936_EUBR3
rnhB; ribonuclease HII
L2_026_000M1_scaffold_667_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11379..12224)
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIT1_9FIRM
ribosome biogenesis GTP-binding protein YlqF
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_667_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12264..12848)
DNA (585bp) protein (195aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:CBK90104.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Signal peptidase I n=3 Tax=Eubacterium rectale RepID=C4Z934_EUBR3
L2_026_000M1_scaffold_667_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12994..13347)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z933_EUBR3
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13489..15090)
DNA (1602bp) protein (534aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIT4_9FIRM
tRNA (guanine-N1)-methyltransferase
L2_026_000M1_scaffold_667_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15198..15704)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=2 Tax=Eubacterium rectale RepID=C4Z931_EUBR3
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_667_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15837..16067)
DNA (231bp) protein (77aa)
UPF0109 protein EUBREC_1507 n=4 Tax=Eubacterium RepID=C4Z930_EUBR3
RNA-binding protein (KH domain)
UPF0109 protein EUBREC_1507 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16085..16330)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=4 Tax=Eubacterium RepID=RS16_EUBR3
SSU ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_667_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16441..17817)
DNA (1377bp) protein (459aa)
Signal recognition particle protein n=3 Tax=Eubacterium RepID=C4Z928_EUBR3
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17819..18163)
DNA (345bp) protein (115aa)
UPF0122 protein EUBREC_1504 n=4 Tax=Eubacterium RepID=Y1504_EUBR3
hypothetical protein
UPF0122 protein ERE_15810 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_667_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18252..18704)
DNA (453bp) protein (151aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine dehydratase, medium form {ECO:0000313|EMBL:CBK93537.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBK93537.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Threonine dehydratase, medium form n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3X2_9FIRM
L2_026_000M1_scaffold_667_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18718..19233)
DNA (516bp) protein (172aa)
Threonine dehydratase n=3 Tax=Eubacterium RepID=C4Z926_EUBR3
threonine dehydratase
Threonine dehydratase {ECO:0000313|EMBL:ACR75257.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19377..19988)
DNA (612bp) protein (204aa)
Signal recognition particle receptor FtsY n=2 Tax=Eubacterium RepID=C4Z925_EUBR3
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19979..20182)
DNA (204bp) protein (68aa)
Signal recognition particle receptor FtsY n=2 Tax=Eubacterium RepID=C4Z925_EUBR3
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20206..23766)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z924_EUBR3
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23776..24459)
DNA (684bp) protein (228aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Ribonuclease 3 n=4 Tax=Eubacterium RepID=C4Z923_EUBR3
ribonuclease III
L2_026_000M1_scaffold_667_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24555..24791)
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3X6_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_667_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24847..25863)
DNA (1017bp) protein (339aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Phosphate acyltransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3X7_9FIRM
fatty acid/phospholipid synthesis protein plsX
L2_026_000M1_scaffold_667_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25973..26200)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=3 Tax=Eubacterium rectale RepID=C4Z920_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93543.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_667_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26380..26559)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=5 Tax=Clostridiales RepID=C4Z919_EUBR3
ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_667_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26564..27085)
DNA (522bp) protein (174aa)
Predicted Zn-finger-like protein, possible nucleic acid binding n=2 Tax=Eubacterium rectale RepID=C4Z918_EUBR3
Predicted metal-binding, possibly nucleic acid-binding protein
Predicted metal-binding, possibly nucleic acid-binding protein {ECO:0000313|EMBL:CBK93545.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_667_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27179..28372)
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000255|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000255|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000255|HAMAP-Rule:MF_00020}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Acetate kinase n=2 Tax=Eubacterium RepID=ACKA_EUBR3
acetate kinase
L2_026_000M1_scaffold_667_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28509..29759
DNA (1251bp) protein (417aa)
UPF0348 protein EUBREC_1493 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=Y1493_EUBR3
hypothetical protein
UPF0348 protein EUBREC_1493 {ECO:0000255|HAMAP-Rule:MF_01539}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_667_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29761..30873)
DNA (1113bp) protein (371aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
3-dehydroquinate synthase n=2 Tax=Eubacterium rectale RepID=C4Z915_EUBR3
Displaying items 1-30 of 54 in total

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