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L2_026_000M1_scaffold_671

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_671_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77414.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_026_000M1_scaffold_671_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(335..520)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76287.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative stress-responsive transcriptional regulator
L2_026_000M1_scaffold_671_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(660..1616)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77416.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF2807).
L2_026_000M1_scaffold_671_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1613..2320)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77417.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1700).
L2_026_000M1_scaffold_671_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2317..2637)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76290.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, PadR family
L2_026_000M1_scaffold_671_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3400..4803
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76291.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
NOL1/NOP2/sun family putative RNA methylase
L2_026_000M1_scaffold_671_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4858..8667)
DNA (3810bp) protein (1270aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
recombination helicase AddA, Firmicutes type (EC:3.1.11.5)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHH6_9FIRM
L2_026_000M1_scaffold_671_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8669..12043)
DNA (3375bp) protein (1125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77422.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent nuclease subunit B
L2_026_000M1_scaffold_671_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12147..12584
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76294.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_026_000M1_scaffold_671_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12646..14562)
DNA (1917bp) protein (639aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:EES76295.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_026_000M1_scaffold_671_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14621..15499)
DNA (879bp) protein (293aa)
33 kDa chaperonin n=2 Tax=Ruminococcus RepID=C6JEU9_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Disulfide bond chaperones of the HSP33 family
L2_026_000M1_scaffold_671_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15617..16096)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77440.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_026_000M1_scaffold_671_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16101..16247)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77440.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_026_000M1_scaffold_671_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16419..17564)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77442.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_026_000M1_scaffold_671_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17885..20029)
DNA (2145bp) protein (715aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV3_9FIRM
L2_026_000M1_scaffold_671_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20237..22075)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76301.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_026_000M1_scaffold_671_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22072..24234)
DNA (2163bp) protein (721aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLN1_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD78657.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter ATP-binding protein/permease
L2_026_000M1_scaffold_671_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24375..24848)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E5DB87
Uncharacterized protein {ECO:0000313|EMBL:EES76303.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, MarR family
L2_026_000M1_scaffold_671_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25082..25966)
DNA (885bp) protein (295aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKW0_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD78661.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L2_026_000M1_scaffold_671_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26140..27474
DNA (1335bp) protein (445aa)
Transporter n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sodium:neurotransmitter symporter
L2_026_000M1_scaffold_671_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27550..28551)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76306.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_026_000M1_scaffold_671_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28567..30132)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76484.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transporter, UIT6 family (TC 9.B.53)
L2_026_000M1_scaffold_671_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30433..30606)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEW1_9FIRM
Heat-shock protein 101 {ECO:0000313|EMBL:CDD76483.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_026_000M1_scaffold_671_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30607..33198)
DNA (2592bp) protein (864aa)
ATP-dependent chaperone ClpB n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW2_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP-dependent chaperone ClpB
L2_026_000M1_scaffold_671_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33745..33846)
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70351.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ORF6N domain.
L2_026_000M1_scaffold_671_26
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33843..34028)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70351.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ORF6N domain.
L2_026_000M1_scaffold_671_27
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34225..35268)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XEV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06981.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L2_026_000M1_scaffold_671_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35265..36788)
DNA (1524bp) protein (508aa)
Efflux transporter RND family MFP subunit n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I8W4_9FIRM
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCY33427.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Membrane-fusion protein
L2_026_000M1_scaffold_671_29
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36815..37702)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WUA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06983.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_026_000M1_scaffold_671_30
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37699..38643)
DNA (945bp) protein (315aa)
ABC-type sugar transport system permease component n=2 Tax=Blautia RepID=R5C7V4_9FIRM
ABC-type sugar transport system permease component {ECO:0000313|EMBL:CCX59696.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Displaying items 1-30 of 37 in total

View Taxonomy