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L2_026_000M1_scaffold_705

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_705_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..591
DNA (591bp) protein (197aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AID9_9FIRM
Two-component sensor histidine kinaseTn916-like,CTn1-Orf6
L2_026_000M1_scaffold_705_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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736..1299
DNA (564bp) protein (188aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAQ4_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEV01072.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
DNA-directed RNA polymerase specialized sigma subunit
L2_026_000M1_scaffold_705_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1301..1549
DNA (249bp) protein (83aa)
Uncharacterized protein n=18 Tax=Clostridiales RepID=A5ZV55_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEA81228.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000M1_scaffold_705_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1713..1907
DNA (195bp) protein (65aa)
Uncharacterized protein n=7 Tax=Clostridiales RepID=B6FU65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGG83777.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_026_000M1_scaffold_705_5
unknown

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1923..2051
DNA (129bp) protein (43aa)

This feature has no annotations

L2_026_000M1_scaffold_705_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2012..3232
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XJU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18409.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Site-specific recombinase XerC
L2_026_000M1_scaffold_705_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3708..3977
DNA (270bp) protein (90aa)
Helix-turn-helix n=2 Tax=Eubacterium rectale RepID=D4JPI8_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK90676.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_705_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3961..4215
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNU9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94768.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_705_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4229..4936
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D4JNU8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90672.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_705_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4953..5744
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5I1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90671.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_705_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6001..11256
DNA (5256bp) protein (1752aa)
tRNA synthetases class I (E and Q), anti-codon binding domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NF13_CLODI
tRNA synthetases class I (E and Q), anti-codon binding domain protein {ECO:0000313|EMBL:EQJ54291.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Cna protein B-type domain.
L2_026_000M1_scaffold_705_12
unknown

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11334..11534
DNA (201bp) protein (67aa)

This feature has no annotations

L2_026_000M1_scaffold_705_13
unknown

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11549..11881
DNA (333bp) protein (111aa)

This feature has no annotations

L2_026_000M1_scaffold_705_14
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11894..12703
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R0H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43226.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L2_026_000M1_scaffold_705_15
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12719..13099
DNA (381bp) protein (127aa)
Uncharacterized protein (Fragment) n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37529.1}; Flags: Fragment;; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_026_000M1_scaffold_705_16
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13117..15039
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43224.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Domain of unknown function DUF87.
L2_026_000M1_scaffold_705_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15060..16412
DNA (1353bp) protein (451aa)
CHAP domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EU90_9FIRM
CHAP domain protein {ECO:0000313|EMBL:EEG37148.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
CHAP domain.
L2_026_000M1_scaffold_705_18
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16372..16803
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R104_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43225.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L2_026_000M1_scaffold_705_19
unknown

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16803..17246
DNA (444bp) protein (148aa)

This feature has no annotations

L2_026_000M1_scaffold_705_20
unknown

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17264..17557
DNA (294bp) protein (98aa)

This feature has no annotations

L2_026_000M1_scaffold_705_21
unknown

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17947..18189
DNA (243bp) protein (81aa)

This feature has no annotations

L2_026_000M1_scaffold_705_22
unknown

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18182..18397
DNA (216bp) protein (72aa)

This feature has no annotations

L2_026_000M1_scaffold_705_23
unknown

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18511..18825
DNA (315bp) protein (105aa)

This feature has no annotations

L2_026_000M1_scaffold_705_24
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18770..19111
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EN78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98261.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L2_026_000M1_scaffold_705_25
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19176..20633
DNA (1458bp) protein (486aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EMA8_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:CDA98264.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L2_026_000M1_scaffold_705_26
unknown

Not on your lists

20655..20774
DNA (120bp) protein (40aa)

This feature has no annotations

L2_026_000M1_scaffold_705_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20774..21781
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20827.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_026_000M1_scaffold_705_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21804..28496
DNA (6693bp) protein (2231aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE83_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31099.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
adenine-specific DNA methylase
L2_026_000M1_scaffold_705_29
unknown

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28529..28663
DNA (135bp) protein (45aa)

This feature has no annotations

L2_026_000M1_scaffold_705_30
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28656..29219
DNA (564bp) protein (188aa)
DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RXW2_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EFF69194.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
DNA repair proteins
Displaying items 1-30 of 77 in total

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