ggKbase home page

L2_026_000M1_scaffold_711

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_711_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(150..1640)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14521.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
glycosyl transferase family 1
L2_026_000M1_scaffold_711_2
unknown

Not on your lists

1707..1997
DNA (291bp) protein (97aa)

This feature has no annotations

L2_026_000M1_scaffold_711_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1970..2851)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X997_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
xerD; tyrosine recombinase XerD
L2_026_000M1_scaffold_711_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2882..3502)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X998_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48067.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_026_000M1_scaffold_711_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..5244)
DNA (1425bp) protein (475aa)
SCIFF radical SAM maturase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X999_9FIRM
SCIFF radical SAM maturase {ECO:0000313|EMBL:EGJ48068.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L2_026_000M1_scaffold_711_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5343..5483)
DNA (141bp) protein (47aa)
Six-cysteine peptide SCIFF n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A0_9FIRM
Six-cysteine peptide SCIFF {ECO:0000313|EMBL:EGJ48069.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5576..6022)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48070.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6110..6367)
DNA (258bp) protein (86aa)
Preprotein translocase, YajC subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A2_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EGJ48071.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6479..7615)
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A3_9FIRM
L2_026_000M1_scaffold_711_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7672..8697)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A4_9FIRM
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_026_000M1_scaffold_711_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8726..9190)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48074.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9293..10456)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48074.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10887..11978
DNA (1092bp) protein (364aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A6_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EGJ48075.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_026_000M1_scaffold_711_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12160..13047
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A7_9FIRM
dihydrodipicolinate synthase
L2_026_000M1_scaffold_711_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13064..13819
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dapB; 4-hydroxy-tetrahydrodipicolinate reductase (EC:1.17.1.-)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A8_9FIRM
L2_026_000M1_scaffold_711_16
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13959..14162
DNA (204bp) protein (68aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F184_DESDL
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA67589.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L2_026_000M1_scaffold_711_17
Anoxybacillus ayderensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14164..14493
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Geobacillus sp. (strain C56-T3) RepID=D7D2B8_GEOSC
hypothetical protein
Strain AB04 contig000002, whole genome shotgun sequence {ECO:0000313|EMBL:KIP22271.1}; TaxID=265546 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus ayderensis.;"
L2_026_000M1_scaffold_711_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

14507..15253
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13265.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
L2_026_000M1_scaffold_711_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15316..16545)
DNA (1230bp) protein (410aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC47_9FIRM
L2_026_000M1_scaffold_711_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16566..17435)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48082.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_21
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(17888..18769)
DNA (882bp) protein (294aa)
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAX9_9FIRM
L-serine ammonia-lyase {ECO:0000313|EMBL:CCY26673.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L2_026_000M1_scaffold_711_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18783..19442)
DNA (660bp) protein (220aa)
sdaA; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSM5_9CLOT
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EOQ35454.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_026_000M1_scaffold_711_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19469..20671)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35455.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Na+/H+-dicarboxylate symporters
L2_026_000M1_scaffold_711_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20926..21426)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47876.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_711_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21550..22191)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP9_9FIRM
L2_026_000M1_scaffold_711_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22206..22931)
DNA (726bp) protein (242aa)
Universal bacterial protein YeaZ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP8_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EGJ47776.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M22 family protein
L2_026_000M1_scaffold_711_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22996..23424)
DNA (429bp) protein (143aa)
YjeE family ATPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP7_9FIRM
YjeE family ATPase {ECO:0000313|EMBL:EGJ47775.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_026_000M1_scaffold_711_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23550..24737
DNA (1188bp) protein (396aa)
Rod shape determining protein RodA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP6_9FIRM
Rod shape determining protein RodA {ECO:0000313|EMBL:EGJ47774.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative cell division protein FtsW
L2_026_000M1_scaffold_711_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24734..26125
DNA (1392bp) protein (464aa)
Aldehyde dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC0_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Aldehyde Dehydrogenase
L2_026_000M1_scaffold_711_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26232..27236
DNA (1005bp) protein (335aa)
dGTPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC1_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
deoxyguanosinetriphosphate triphosphohydrolase
Displaying items 1-30 of 33 in total

View Taxonomy