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L2_026_000M1_scaffold_730

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_730_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..702
DNA (702bp) protein (234aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEW6_9FIRM
L2_026_000M1_scaffold_730_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(867..1271)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46772.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_730_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1343..2626)
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD77_9FIRM
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:EGJ46773.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_026_000M1_scaffold_730_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2712..3209)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46774.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative germination protein
L2_026_000M1_scaffold_730_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3206..4693)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative two-component histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD79_9FIRM
L2_026_000M1_scaffold_730_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4722..5435)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46776.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
OmpR family two-component response regulator
L2_026_000M1_scaffold_730_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5478..5885)
DNA (408bp) protein (136aa)
Competence protein ComEA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD81_9FIRM
Competence protein ComEA {ECO:0000313|EMBL:EGJ46777.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_026_000M1_scaffold_730_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6017..7378
DNA (1362bp) protein (454aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46778.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_026_000M1_scaffold_730_9
unknown

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comp(7640..7873)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_026_000M1_scaffold_730_10
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7955..8581)
DNA (627bp) protein (209aa)
HD domain protein n=2 Tax=Firmicutes RepID=A8RFR6_9FIRM
HD domain protein {ECO:0000313|EMBL:CDE23588.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L2_026_000M1_scaffold_730_11
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8842..10689)
DNA (1848bp) protein (616aa)
Putative surface layer protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRI4_OSCVS
putative surface layer protein
Putative surface layer protein {ECO:0000313|EMBL:BAK97454.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_026_000M1_scaffold_730_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10703..11899)
DNA (1197bp) protein (399aa)
Efflux ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2RUR0_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERK59238.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative drug efflux ABC transporter permease protein
L2_026_000M1_scaffold_730_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11896..12630)
DNA (735bp) protein (245aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAG8_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDC30009.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
putative drug efflux ABC transporter ATP-binding protein
L2_026_000M1_scaffold_730_14
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12627..14360)
DNA (1734bp) protein (578aa)
Putative drug efflux protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRI1_OSCVS
putative drug efflux protein
Putative drug efflux protein {ECO:0000313|EMBL:BAK97451.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_026_000M1_scaffold_730_15
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

14580..15257
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EJN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91504.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
OmpR family two-component response regulator
L2_026_000M1_scaffold_730_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15251..16495
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DBS0_9CLOT
L2_026_000M1_scaffold_730_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16784..17716)
DNA (933bp) protein (311aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=2 Tax=Clostridiales RepID=U2BSR0_9CLOT
Succinylglutamate desuccinylase/aspartoacylase family protein {ECO:0000313|EMBL:ERI81199.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted deacylase
L2_026_000M1_scaffold_730_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17713..18516)
DNA (804bp) protein (268aa)
Oligopeptide ABC transporter, ATP-binding protein OppF family protein n=2 Tax=Clostridiales RepID=U2CB31_9CLOT
Oligopeptide ABC transporter, ATP-binding protein OppF family protein {ECO:0000313|EMBL:ERI81198.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L2_026_000M1_scaffold_730_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18509..19339)
DNA (831bp) protein (277aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2DIC5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI81197.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L2_026_000M1_scaffold_730_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19336..20160)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CFU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32317.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_026_000M1_scaffold_730_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20164..21102)
DNA (939bp) protein (313aa)
Nickel ABC transporter, permease subunit NikB n=2 Tax=Clostridiales RepID=H1CFU4_9FIRM
Putative nickel ABC transporter, permease subunit NikB {ECO:0000313|EMBL:ERI81195.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_026_000M1_scaffold_730_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21177..22790)
DNA (1614bp) protein (538aa)
Nickel ABC transporter, periplasmic nickel-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BSQ8_9CLOT
Nickel ABC transporter, periplasmic nickel-binding protein {ECO:0000313|EMBL:ERI81194.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
nickel ABC transporter, periplasmic nickel-binding protein
L2_026_000M1_scaffold_730_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22887..23810)
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridiales RepID=U2CB28_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERI81193.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Transcriptional regulator
L2_026_000M1_scaffold_730_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24058..24201)
DNA (144bp) protein (48aa)
Transcriptional regulator, AraC family n=2 Tax=Oscillibacter RepID=U2RXJ6_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK59687.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_026_000M1_scaffold_730_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24267..24491)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2I4_9CLOT
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERK59689.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Copper chaperone
L2_026_000M1_scaffold_730_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24598..25380)
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DFG4_9CLOT
Metal cation transporter, ZIP family {ECO:0000313|EMBL:ERI78286.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
zinc/iron permease
L2_026_000M1_scaffold_730_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25394..25552)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99483.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_026_000M1_scaffold_730_28
unknown

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25706..26089
DNA (384bp) protein (128aa)

This feature has no annotations

L2_026_000M1_scaffold_730_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26029..26538
DNA (510bp) protein (170aa)
Resolvase protein n=2 Tax=Oscillibacter RepID=U2QEA2_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERK62559.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative recombinase
L2_026_000M1_scaffold_730_30
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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27132..27407
DNA (276bp) protein (92aa)
Prevent-host-death family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LU85_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:CEO89846.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
prevent-host-death family protein
Displaying items 1-30 of 34 in total

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