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L2_026_000M1_scaffold_769

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_769_1
unknown

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3..185
DNA (183bp) protein (61aa)

This feature has no annotations

L2_026_000M1_scaffold_769_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(363..1226)
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSQ0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFB74283.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
rhaS; AraC-type sugar metabolism regulator
L2_026_000M1_scaffold_769_3
unknown

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comp(1523..3184)
DNA (1662bp) protein (554aa)

This feature has no annotations

L2_026_000M1_scaffold_769_4

Not on your lists

comp(3321..4307)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9G7R1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX02904.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L2_026_000M1_scaffold_769_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4785..5780)
DNA (996bp) protein (332aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFB75087.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFB75087.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.28)
4-phosphoerythronate dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQE2_9FIRM
L2_026_000M1_scaffold_769_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6129..7667)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75177.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_026_000M1_scaffold_769_7
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7978..8286)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LZR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO49095.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_026_000M1_scaffold_769_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8300..8578)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM23_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFQ05789.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_026_000M1_scaffold_769_9
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8731..9864)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis BM4654 RepID=U7SA34_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:ERT29179.1}; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
hypothetical protein
L2_026_000M1_scaffold_769_10
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9879..10820)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis BM4654 RepID=U7SAN6_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:ERT29178.1}; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
L2_026_000M1_scaffold_769_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10820..11497)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis BM4654 RepID=U7SBP8_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:ERT29177.1}; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
L2_026_000M1_scaffold_769_12
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11814..13031)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFT7_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA48225.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L2_026_000M1_scaffold_769_13
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13028..15415)
DNA (2388bp) protein (796aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFT6_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA48224.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L2_026_000M1_scaffold_769_14
unknown

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comp(15636..16220)
DNA (585bp) protein (195aa)

This feature has no annotations

L2_026_000M1_scaffold_769_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16184..16840)
DNA (657bp) protein (219aa)
Antibiotic transport system ATP-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCQ3_9FIRM
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:CDE37111.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
antibiotic transport system ATP-binding protein
L2_026_000M1_scaffold_769_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16851..17672)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37110.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_026_000M1_scaffold_769_17
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17662..18495)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40450.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_026_000M1_scaffold_769_18
unknown

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comp(18501..19292)
DNA (792bp) protein (264aa)

This feature has no annotations

L2_026_000M1_scaffold_769_19
unknown

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comp(19384..19863)
DNA (480bp) protein (160aa)

This feature has no annotations

L2_026_000M1_scaffold_769_20
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(20065..20454)
DNA (390bp) protein (130aa)
DNA-binding helix-turn-helix protein n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E2T5_LACJH
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEJ60835.1}; TaxID=525330 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii ATCC 33200.;"
L2_026_000M1_scaffold_769_21

Not on your lists

20587..21348
DNA (762bp) protein (254aa)
Response regulator of the LytR/AlgR family n=1 Tax=human gut metagenome RepID=K1UUE2_9ZZZZ
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EKC75246.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Response regulator of the LytR/AlgR family
L2_026_000M1_scaffold_769_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21351..22682
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77368.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_026_000M1_scaffold_769_23

Not on your lists

22773..23336
DNA (564bp) protein (188aa)
Accessory gene regulator B n=1 Tax=human gut metagenome RepID=K1RUU2_9ZZZZ
Accessory gene regulator B {ECO:0000313|EMBL:EKC52332.1}; Uncharacterized protein {ECO:0000313|EMBL:EKC77021.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L2_026_000M1_scaffold_769_24
unknown

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23379..23549
DNA (171bp) protein (57aa)

This feature has no annotations

L2_026_000M1_scaffold_769_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24002..24658
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39333.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_769_26
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24796..25917
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D276_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54559.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_026_000M1_scaffold_769_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25931..26548
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YMK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09042.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
phage replisome organizer, putative, N-terminal region
L2_026_000M1_scaffold_769_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26662..27528
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X155_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09041.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
phage DNA replication protein (predicted replicative helicase loader)
L2_026_000M1_scaffold_769_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27557..28054
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39340.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_769_30
unknown

Not on your lists

28067..28243
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 30 items

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