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L2_026_000M1_scaffold_3331

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_3331_1
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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32..799
DNA (768bp) protein (256aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Histidine--tRNA ligase n=2 Tax=Bacteroides vulgatus RepID=SYH_BACV8
L2_026_000M1_scaffold_3331_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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768..1250
DNA (483bp) protein (161aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Bacteroides RepID=C6Z738_9BACE
Histidyl tRNA synthetase suspected. See adjacent gene [L2_026_000M1_scaffold_3331_1].
L2_026_000M1_scaffold_3331_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1764..2867)
DNA (1104bp) protein (368aa)
Hydrogenase maturation GTPase HydF n=4 Tax=root RepID=C6ZA76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66936.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
GTPase
L2_026_000M1_scaffold_3331_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2931..4349)
DNA (1419bp) protein (473aa)
Thiamine biosynthesis protein ThiH n=7 Tax=Bacteroides RepID=A6KXA4_BACV8
thiH; thiamine biosynthesis protein ThiH
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:EFV66937.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_026_000M1_scaffold_3331_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4362..5396)
DNA (1035bp) protein (345aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase n=7 Tax=root RepID=A6KXA3_BACV8
[FeFe] hydrogenase H-cluster radical SAM maturase HydE {ECO:0000313|EMBL:KDS28172.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_026_000M1_scaffold_3331_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5405..7156)
DNA (1752bp) protein (584aa)
4Fe-4S binding domain protein n=4 Tax=Bacteroides RepID=C6ZA79_9BACE
[FeFe] hydrogenase, group B1/B3 {ECO:0000313|EMBL:EOS00135.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hydrogenase
L2_026_000M1_scaffold_3331_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7252..7524
DNA (273bp) protein (91aa)
10 kDa chaperonin n=16 Tax=Bacteroides RepID=CH10_BACV8
molecular chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L2_026_000M1_scaffold_3331_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7566..9203
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=21 Tax=root RepID=CH60_BACV8
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
groEL; molecular chaperone GroEL
L2_026_000M1_scaffold_3331_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9397..10779
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TWB4_BACVU
MATE efflux family protein {ECO:0000313|EMBL:EIY74016.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
transmembrane cation efflux protein
L2_026_000M1_scaffold_3331_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10815..11399
DNA (585bp) protein (195aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Bacteroides RepID=D4V7T2_BACVU
regulatory protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KDS54898.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_026_000M1_scaffold_3331_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11396..11515
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7T1_BACVU
Putative membrane protein {ECO:0000313|EMBL:KDS26267.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_026_000M1_scaffold_3331_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11590..12129
DNA (540bp) protein (180aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX97_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38061.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_026_000M1_scaffold_3331_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12253..13680)
DNA (1428bp) protein (476aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bacteroides RepID=C6ZA85_9BACE
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EET17794.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
oxidoreductase
L2_026_000M1_scaffold_3331_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13840..13950)
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=root RepID=G1UMW0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27416.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_026_000M1_scaffold_3331_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14735..15385
DNA (651bp) protein (217aa)
Pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=Bacteroides RepID=C6ZA86_9BACE
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EET17795.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
general stress protein
L2_026_000M1_scaffold_3331_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15738..16355
DNA (618bp) protein (206aa)
DJ-1/PfpI family protein n=4 Tax=Bacteroides RepID=D4V7S6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EFV66947.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
DJ-1/PfpI family protein
L2_026_000M1_scaffold_3331_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16360..16665
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZ17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54890.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_026_000M1_scaffold_3331_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17290..17790)
DNA (501bp) protein (167aa)
Hydrolase, NUDIX family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5R6_BACVU
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFG18813.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
NTP pyrophosphohydrolase
L2_026_000M1_scaffold_3331_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17909..19099)
DNA (1191bp) protein (397aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Histidine ammonia-lyase n=2 Tax=Bacteroides RepID=C6ZA90_9BACE
histidine ammonia-lyase
L2_026_000M1_scaffold_3331_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19134..19757)
DNA (624bp) protein (208aa)
Formiminotransferase-cyclodeaminase n=7 Tax=Bacteroides RepID=D4V5R4_BACVU
methenyltetrahydrofolate cyclohydrolase
Uncharacterized protein {ECO:0000313|EMBL:EIY74024.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_026_000M1_scaffold_3331_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19778..21022)
DNA (1245bp) protein (415aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Imidazolonepropionase n=2 Tax=Bacteroides RepID=D4V5R3_BACVU
imidazolonepropionase
L2_026_000M1_scaffold_3331_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21069..21446)
DNA (378bp) protein (126aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6KX91_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17253.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_026_000M1_scaffold_3331_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21473..22375)
DNA (903bp) protein (301aa)
Glutamate formiminotransferase n=2 Tax=Bacteroides RepID=I8ZGA9_BACVU
Glutamate formiminotransferase {ECO:0000313|EMBL:CDF17254.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
formiminotransferase-cyclodeaminase
L2_026_000M1_scaffold_3331_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22458..24455)
DNA (1998bp) protein (666aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=5 Tax=root RepID=A6KX89_BACV8
Displaying 24 items

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