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L2_026_000M1_scaffold_3833

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_3833_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(45..1334)
DNA (1290bp) protein (430aa)
collagenase. Unknown type peptidase. MEROPS family U32 (EC:3.4.-.-)
Collagenase n=7 Tax=Bacteroides RepID=C3QS06_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN04738.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L2_026_000M1_scaffold_3833_2
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1371..2273
DNA (903bp) protein (301aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
tRNA-dihydrouridine synthase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QS07_9BACE
tRNA-U20-dihydrouridine synthase
L2_026_000M1_scaffold_3833_3
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2364..3329)
DNA (966bp) protein (322aa)
PAP2 family protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QS08_9BACE
PAP2 family protein {ECO:0000313|EMBL:EEO54590.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
PAP2 superfamily.
L2_026_000M1_scaffold_3833_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3320..4327)
DNA (1008bp) protein (336aa)
Nucleoside-diphosphate-sugar epimerases (EC:5.1.3.2)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bacteroides RepID=C3QS09_9BACE
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KDS11186.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L2_026_000M1_scaffold_3833_5
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4372..4974
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=D4WNJ0_BACOV
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI39348.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L2_026_000M1_scaffold_3833_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5037..6200
DNA (1164bp) protein (388aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=C3QS11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY57377.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Fe2+-dicitrate sensor, membrane component
L2_026_000M1_scaffold_3833_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6352..6786
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L519_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY57376.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Outer membrane receptor proteins, mostly Fe transport
L2_026_000M1_scaffold_3833_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6779..9700
DNA (2922bp) protein (974aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JY01_9BACE
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFF49886.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_026_000M1_scaffold_3833_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9724..11292
DNA (1569bp) protein (523aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8Y2N2_BACOV
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS20161.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
SusD family.
L2_026_000M1_scaffold_3833_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11314..12210
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6J8V5_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EFF49884.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_026_000M1_scaffold_3833_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12223..13341
DNA (1119bp) protein (373aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI4_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF49883.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
Displaying 11 items

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