ggKbase home page

L2_026_000M1_scaffold_38_12

Organism: L2_026_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: 13032..13592

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMS9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 369
  • Evalue 1.90e-99
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN12811.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 369
  • Evalue 2.70e-99
ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 184.0
  • Bit_score: 261
  • Evalue 1.60e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGGGAGAGAATCGAGACGATATCATACAGTGGGCTTGTGAAATGGCCTTATCGGATTCACAAACCGCTCTTAAATCGCTTTACATGACCTATTTCGGGCCACTAATACGATTTACGGGCATGTATGTCTCATCCCCGGCAGAAGCCGAAGAAATTGTTTCCGATACCTTCTTAGCTATCTGGAACAACCGCAAACAGCTACCCGGCATCTCTAATTTCGATTCTTACATATATACGGTAGCCCGCCACAAGGCGATCAGCTATTATCGTAAACAACACATGGAGCAGGTATCGCTGGACGAAATCTCCATCGACCTTTTCACATCGACCGAAACGACTCCCGAAGAAGAGCTTATCAGCCAAGAAGGAATTCACCGCCTGAACTTGGCAATCGACTCGCTACCCGCCAAATGCAAGATGGCTTTCAAACTCGTCCGCGAGGACAAGCTCAAATATAAAGAAGTGGCTGCCATCCTCGACATCTCCGTCAAAACATTGGAAGCACACTTGGCGAATGCCGTCCGCAAACTGCGGGAAACACTTGCCGACGATTGCATCTGA
PROTEIN sequence
Length: 187
LGENRDDIIQWACEMALSDSQTALKSLYMTYFGPLIRFTGMYVSSPAEAEEIVSDTFLAIWNNRKQLPGISNFDSYIYTVARHKAISYYRKQHMEQVSLDEISIDLFTSTETTPEEELISQEGIHRLNLAIDSLPAKCKMAFKLVREDKLKYKEVAAILDISVKTLEAHLANAVRKLRETLADDCI*