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L2_026_000M1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_38_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56..292
DNA (237bp) protein (79aa)
Acyl carrier protein n=14 Tax=Bacteroidales RepID=A7AHB2_9PORP
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
acpP; acyl carrier protein
L2_026_000M1_scaffold_38_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

314..1579
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMT6_9PORP
3-oxoacyl-ACP synthase
L2_026_000M1_scaffold_38_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1623..2486
DNA (864bp) protein (288aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Ribonuclease 3 n=2 Tax=Parabacteroides merdae RepID=A7AHB0_9PORP
ribonuclease III
L2_026_000M1_scaffold_38_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2483..3496)
DNA (1014bp) protein (338aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=4 Tax=Parabacteroides RepID=A7AHA9_9PORP
Phosphofructokinase {ECO:0000313|EMBL:EDN85726.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_38_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3576..5090
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AAX6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12818.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
auxin-regulated protein
L2_026_000M1_scaffold_38_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5127..5930)
DNA (804bp) protein (268aa)
PAP2 family protein n=3 Tax=Parabacteroides merdae RepID=A7AHA7_9PORP
PAP2 family protein {ECO:0000313|EMBL:EDN85724.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_38_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6060..7157)
DNA (1098bp) protein (366aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
2-aminoethylphosphonate--pyruvate transaminase n=2 Tax=Parabacteroides merdae RepID=A7AHA6_9PORP
2-aminoethylphosphonate--pyruvate transaminase
L2_026_000M1_scaffold_38_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7175..7963)
DNA (789bp) protein (263aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Phosphonoacetaldehyde hydrolase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNH3_9PORP
phosphonoacetaldehyde hydrolase
L2_026_000M1_scaffold_38_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8000..9346)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AHA4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85721.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_38_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9544..10422
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AHA3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85720.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_38_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10580..12835)
DNA (2256bp) protein (752aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHA2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12678.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphate/sulfate permease
L2_026_000M1_scaffold_38_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13032..13592
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMS9_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN12811.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ECF-type sigma factor
L2_026_000M1_scaffold_38_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13830..14813
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12810.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma factor
L2_026_000M1_scaffold_38_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14926..18282
DNA (3357bp) protein (1119aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B6W0_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEC97831.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_026_000M1_scaffold_38_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18295..20133
DNA (1839bp) protein (613aa)
SusD family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B6V9_9PORP
SusD family protein {ECO:0000313|EMBL:EEC97830.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
RagB/SusD domain-containing protein
L2_026_000M1_scaffold_38_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20230..21618
DNA (1389bp) protein (463aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5G2_9PORP
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EEC98344.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
FAD dependent oxidoreductase
L2_026_000M1_scaffold_38_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21740..24742
DNA (3003bp) protein (1001aa)
Tat (Twin-arginine translocation) pathway signal sequence n=2 Tax=Parabacteroides RepID=K5ZNG3_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD12692.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_38_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24749..26332
DNA (1584bp) protein (528aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AH95_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85712.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_38_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26387..26611
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0K8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85712.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_38_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26708..27034)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AAW4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12803.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_38_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27227..29200)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YGT5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12802.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative glycosyl hydrolase, beta-N-acetylhexosaminidase
L2_026_000M1_scaffold_38_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29346..30071
DNA (726bp) protein (242aa)
ThiF family protein n=4 Tax=Parabacteroides RepID=A7AH91_9PORP
ThiF family protein {ECO:0000313|EMBL:EDN85708.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ThiF family protein
L2_026_000M1_scaffold_38_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30135..30803
DNA (669bp) protein (223aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter, ATP-binding protein n=3 Tax=Parabacteroides merdae RepID=A7AH90_9PORP
lipoprotein releasing system ATP-binding protein
L2_026_000M1_scaffold_38_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30860..32227
DNA (1368bp) protein (456aa)
Transporter n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZB06_9PORP
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Na+-dependent transporter
L2_026_000M1_scaffold_38_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32346..33116
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AAW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12798.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_38_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33120..33998)
DNA (879bp) protein (293aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE90_9PORP
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CDD14626.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_38_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34025..35779)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BET4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12796.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RagB/SusD domain-containing protein
L2_026_000M1_scaffold_38_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35799..39077)
DNA (3279bp) protein (1093aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNF6_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN12795.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-dependent receptor plug
L2_026_000M1_scaffold_38_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39182..39565)
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AH84_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85701.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_38_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39543..40325)
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AH83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85700.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
Displaying items 1-30 of 121 in total

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