ggKbase home page

L2_026_000M1_scaffold_214_9

Organism: L2_026_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(12032..13921)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6P4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 629.0
  • Bit_score: 1260
  • Evalue 0.0
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDB44985.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 629.0
  • Bit_score: 1260
  • Evalue 0.0
Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 629.0
  • Bit_score: 934
  • Evalue 8.50e-270

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phascolarctobacterium sp. CAG:207 → Phascolarctobacterium → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1890
ATGATCCGTGAAAAACGTAACAAGGAAAAACTGGCTTCCTATTATCGTAAGTTTATGGAAGACGGTGTCATCGATCCGAACGTCCATCCCTGGGTGGCTGAGTCCTGGCAGCGCTGCCGGGCGATGAAACTGCCCCATGAAACGATGCCTAAGCTCAATAAACTGAGCCGTGAGGAGATCGTTGAACATCAGAAGACCCATGAGTTTATCGTAAAGTATGTCGACGGTTTGTATGAACAAAGCAAACAGCATTTCAATATTCATAATCTGAGCATGCTGCTGATCGATGAAGACGGTTATGTGATCAAAAATTATGCACTGCCCTTTTTTCAGAGAGTGATCGAAGATATACAGGGGATGCGCGTACTGGAAGAGGACGTAGGTACCTCGAGCATCAGTATTGCGCGTGAGCATAATGTACCGTTTTTAATGTTTGGTCCGGAAATGTGGATCAAAGACAGTCATTCCGGCGATGCCTGCAGTGCGCCGATCTGTGTCAACGGCAAGATCCGCTACATTATTTCCTTCTTTTCGCTGGATCAGAACGATCTGCCTTATGACCTGCTGCTGTCGCTGCTTTTGACAATGAAATATTCTATCGAGCAGCATCTTTCCATGCTGGAATACTGGAGCATTTATCAGCTGATGATGAATGAACTGCCGGTGGCCGTGTACTGGATCGGTCAGGACGAGCAGTTGAAATACTGTAATAACAATGCGCAAAAGCGTCTGGATGGCAAAAAGAACCTGGAAGACGTCTTTTTGAATTATGAGCATATTCCCATCAAAAAAGCCCTGCAGGGTGTACCAACGCATCGTCGTGAGATCACCTGGATCACGCAGGACCGTACCTATGAAGATATTACTACAGTCATGCCGATCAAAGTTGGCAGTGAGGTCGAAAGCGCTTTGGTGATGTCGATGTCGATCGAAGATCTGAAAACTACGATTGCCCATGCTACCGGCTACAGCTCCCGTTACAGTCTGTACAGCATGGTGGGCGAGACCAGTGAATTTTTGGCTTTGCAGCATAAAGCTTCGCGTATTGCCCGCAGCGATAATAATATCCTGCTTCAGGGCGAGCCGGGGACCGGCAAGCAGCGTTTGGCCCATGGTATCCACCAGGCCAGTCCACGTGCGGCTGCACCGTTGATCGTTGTGAAGTGTTCGAATGCGCCGATCGAGGCTTTGGAAGAAGAATTTTTCGGCAGTGTAGACGGTGACCGTCAGCCAATGGCCGGTAAACTGGAGCTGGCACTGGGTGGTACGCTCTTCCTGGACGAGGTCGAAAAGCTGCCTGTGGAAATGGGCGATAAGCTGGCTGATGCCTTGAAAAATGGTTTGGTAAACCGTGAAACCGGTATTCGCAAGAAGTTAAACGTGCGTGTGATCGCCGCCTGCGATTCTAATTTAAAACGCTTGTCTGATAAGGGACTTTTCTCAAAAGCCTTATATGAGCTGGTATTGGATACGACAATGCGTGTTCCGCCTCTGCGCGAGCGCGTGAAAGATATTGAGGTCATCGCTTCCCATATTCTGGCTGAAATGTCGGCGCAGCATAATCTGCCGCCGAAACGTTTGTCGCCGGAAGCGCTGAATCTTTTGACAAGCTGCAGCTGGCCCGGTAATATCAAACAGCTGCAGGGAGTTATTGAGCAGGCATTCTTCCATACTCCCGGAGCGATCATCGAATCCGATAATATCAAGCTTCCTGGTGACCGGACGCTTGAGAAATCCTGGAAATATGATAAAGACGCTTTTATTGCGGCATGGAAATCTGCCGGCGGTAATATCAGTAAACTGGCAGGAATGCTTGATGTCAGCCGTGTTACCCTGTACCGTTATTTGAAAAAATATGGACTGGGACCTAAAGTCGGCAAAGAGGATTAA
PROTEIN sequence
Length: 630
MIREKRNKEKLASYYRKFMEDGVIDPNVHPWVAESWQRCRAMKLPHETMPKLNKLSREEIVEHQKTHEFIVKYVDGLYEQSKQHFNIHNLSMLLIDEDGYVIKNYALPFFQRVIEDIQGMRVLEEDVGTSSISIAREHNVPFLMFGPEMWIKDSHSGDACSAPICVNGKIRYIISFFSLDQNDLPYDLLLSLLLTMKYSIEQHLSMLEYWSIYQLMMNELPVAVYWIGQDEQLKYCNNNAQKRLDGKKNLEDVFLNYEHIPIKKALQGVPTHRREITWITQDRTYEDITTVMPIKVGSEVESALVMSMSIEDLKTTIAHATGYSSRYSLYSMVGETSEFLALQHKASRIARSDNNILLQGEPGTGKQRLAHGIHQASPRAAAPLIVVKCSNAPIEALEEEFFGSVDGDRQPMAGKLELALGGTLFLDEVEKLPVEMGDKLADALKNGLVNRETGIRKKLNVRVIAACDSNLKRLSDKGLFSKALYELVLDTTMRVPPLRERVKDIEVIASHILAEMSAQHNLPPKRLSPEALNLLTSCSWPGNIKQLQGVIEQAFFHTPGAIIESDNIKLPGDRTLEKSWKYDKDAFIAAWKSAGGNISKLAGMLDVSRVTLYRYLKKYGLGPKVGKED*