ggKbase home page

L2_026_000M1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_214_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

120..3980
DNA (3861bp) protein (1287aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44977.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4028..4459)
DNA (432bp) protein (144aa)
VanZ-like protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I480_9FIRM
VanZ-like protein {ECO:0000313|EMBL:CDB44978.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
VanZ like family protein
L2_026_000M1_scaffold_214_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4478..5308)
DNA (831bp) protein (277aa)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEI6_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_214_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5323..6993)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative formyltetrahydrofolate synthetase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6N6_9FIRM
L2_026_000M1_scaffold_214_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7107..9128)
DNA (2022bp) protein (674aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II39_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDB44981.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_214_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9128..10336)
DNA (1209bp) protein (403aa)
Cell cycle protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3X7_9FIRM
Cell cycle protein {ECO:0000313|EMBL:CDB44982.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
cell cycle protein
L2_026_000M1_scaffold_214_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10348..10986)
DNA (639bp) protein (213aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I486_9FIRM
tRNA (guanine-N(7)-)-methyltransferase
L2_026_000M1_scaffold_214_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11184..11804)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44984.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12032..13921)
DNA (1890bp) protein (630aa)
Sigma-54 interaction domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6P4_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDB44985.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Fis family sigma-54 specific transcriptional regulator
L2_026_000M1_scaffold_214_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13975..14661)
DNA (687bp) protein (229aa)
NlpC/P60 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II45_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDB44986.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
NLP/P60 protein
L2_026_000M1_scaffold_214_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14682..15581)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44987.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
radical SAM protein
L2_026_000M1_scaffold_214_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15993..17183)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46139.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
S-layer protein
L2_026_000M1_scaffold_214_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17224..18291)
DNA (1068bp) protein (356aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D206_9CLOT
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:EEG54632.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
L2_026_000M1_scaffold_214_14
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18305..18967)
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Treponema denticola RepID=M2B605_TREDN
Uncharacterized protein {ECO:0000313|EMBL:KKD00163.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
hypothetical protein
L2_026_000M1_scaffold_214_15
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18982..19683)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0S8_HALTV
Uncharacterized protein {ECO:0000313|EMBL:KKD00164.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
hypothetical protein
L2_026_000M1_scaffold_214_16
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19833..20912)
DNA (1080bp) protein (360aa)
Transcriptional regulator, LuxR family n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YLA8_ANEAE
Strain NCTC 7096 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIV58870.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
regulatory protein LuxR
L2_026_000M1_scaffold_214_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21236..22597
DNA (1362bp) protein (454aa)
Electron transport complex protein RnfC n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I491_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
RnfABCDGE type electron transport complex subunit C
L2_026_000M1_scaffold_214_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22631..23665
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEJ8_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
RnfABCDGE type electron transport complex subunit D
L2_026_000M1_scaffold_214_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23658..24242
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6Q0_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24245..24847
DNA (603bp) protein (201aa)
Electron transport complex RnfABCDGE type E subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II52_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
RnfABCDGE type electron transport complex subunit E
L2_026_000M1_scaffold_214_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24837..25412
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3Y7_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25425..26330
DNA (906bp) protein (302aa)
Ferredoxin n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I499_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDB44993.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ferredoxin
L2_026_000M1_scaffold_214_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26327..27352
DNA (1026bp) protein (342aa)
ApbE family lipoprotein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEK3_9FIRM
ApbE family lipoprotein {ECO:0000313|EMBL:CDB44994.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ApbE family lipoprotein
L2_026_000M1_scaffold_214_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27349..27723
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44995.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27707..28225
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44996.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
heptaprenyl diphosphate synthase component I
L2_026_000M1_scaffold_214_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28307..29209
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J408_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44997.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
RND family efflux transporter MFP subunit
L2_026_000M1_scaffold_214_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29299..29832)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I4C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44998.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29861..30589)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44999.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein, possible voltage-gated ion channel
L2_026_000M1_scaffold_214_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30778..31308
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45000.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_214_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31347..32348)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6II78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45001.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
Displaying items 1-30 of 112 in total

View Taxonomy