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L2_026_000M1_scaffold_1407

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1407_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..658)
DNA (657bp) protein (219aa)
Sigma-54 interaction domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBJ2_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDC67044.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Transcriptional regulator
L2_026_000M1_scaffold_1407_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(690..1469)
DNA (780bp) protein (260aa)
Probable amino acid ABC transporter, ATPase component (EC:3.6.3.21)
ABC-type polar amino acid transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4E5_9FIRM
ABC-type polar amino acid transport system ATPase component {ECO:0000313|EMBL:CDC67045.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1407_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1492..2151)
DNA (660bp) protein (220aa)
Probable amino acid ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGS2_9FIRM
Probable amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDC67046.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Probable amino acid ABC transporter, membrane component
L2_026_000M1_scaffold_1407_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2166..2828)
DNA (663bp) protein (221aa)
Putative transporter subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8G1_9FIRM
Probable amino acid ABC transporter, membrane component
Putative transporter subunit {ECO:0000313|EMBL:CDC67047.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1407_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2886..3776)
DNA (891bp) protein (297aa)
Arginine ABC transporter periplasmic arginine-binding protein ArtP family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0V3_9FIRM
Arginine ABC transporter periplasmic arginine-binding protein ArtP family protein {ECO:0000313|EMBL:CDC67048.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Probable amino acid ABC transporter, extracellular solute-binding protein
L2_026_000M1_scaffold_1407_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3909..4814)
DNA (906bp) protein (302aa)
speB3; K01480 agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBJ7_9FIRM
Agmatinase {ECO:0000313|EMBL:CDC67049.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1407_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5371..5781
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67050.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_026_000M1_scaffold_1407_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5778..6095
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67051.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_026_000M1_scaffold_1407_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6129..6809
DNA (681bp) protein (227aa)
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ureA; Urease alpha subunit (helicobacter-like nomenclature) (EC:3.5.1.5)
Urease, gamma subunit n=2 Tax=Ruminococcus RepID=E9SFE6_RUMAL
L2_026_000M1_scaffold_1407_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6813..8525
DNA (1713bp) protein (571aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ureC; urease beta subunit (helicobacter-like nomenclature) (EC:3.5.1.5)
Urease subunit alpha n=2 Tax=Ruminococcus RepID=E9SFE7_RUMAL
L2_026_000M1_scaffold_1407_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8541..9029
DNA (489bp) protein (163aa)
Urease accessory protein UreE n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBK2_9FIRM
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ureE; Urease accessory protein UreE
L2_026_000M1_scaffold_1407_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9046..9720
DNA (675bp) protein (225aa)
ureF; Urease accessory protein UreF (EC:3.5.1.5)
Urease accessory protein UreF n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4F3_9FIRM
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1407_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9757..10368
DNA (612bp) protein (204aa)
Urease accessory protein UreG n=2 Tax=Ruminococcus RepID=E9SFF0_RUMAL
ureG; Urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1407_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10365..11132
DNA (768bp) protein (256aa)
ureD; Urease accessory protein UreD (EC:3.5.1.5)
Urease accessory protein UreD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8G9_9FIRM
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1407_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11349..13628
DNA (2280bp) protein (760aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0V9_9FIRM
Glycoside Hydrolase Family 95 protein {ECO:0000313|EMBL:CCO05603.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Glycoside Hydrolase Family 95 protein
L2_026_000M1_scaffold_1407_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13659..15371
DNA (1713bp) protein (571aa)
Glycosyl hydrolase family 26 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBK6_9FIRM
Glycosyl hydrolase family 26 {ECO:0000313|EMBL:CDC67059.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein
L2_026_000M1_scaffold_1407_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15483..17117
DNA (1635bp) protein (545aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4F7_9FIRM
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:CDC67060.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ATPase
L2_026_000M1_scaffold_1407_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17117..17509
DNA (393bp) protein (131aa)
5-methylcytosine restriction system component-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGT3_9FIRM
5-methylcytosine restriction system component-like protein {ECO:0000313|EMBL:CDC67061.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Displaying 18 items

View Taxonomy