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L2_026_000M1_scaffold_1933

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1933_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..758
DNA (756bp) protein (252aa)
radA; DNA repair protein RadA/Sms (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZJ6_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1933_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(824..1390)
DNA (567bp) protein (189aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3J2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05189.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1933_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1561..2775)
DNA (1215bp) protein (405aa)
Alcohol dehydrogenase, iron-type (EC:1.1.1.1)
Alcohol dehydrogenase iron-dependent n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6M2_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDC65404.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1933_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3243..3866
DNA (624bp) protein (208aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC34_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05191.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1933_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3891..4658
DNA (768bp) protein (256aa)
coaX; pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000313|EMBL:CCO05192.1};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Type III pantothenate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3K1_9FIRM
L2_026_000M1_scaffold_1933_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4862..6835
DNA (1974bp) protein (658aa)
CotH protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6M8_9FIRM
CotH protein {ECO:0000313|EMBL:CDC65409.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_026_000M1_scaffold_1933_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6898..8685)
DNA (1788bp) protein (596aa)
Endoglucanase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZK5_9FIRM
Glycoside Hydrolase Family 5 protein
Glycoside Hydrolase Family 5 protein {ECO:0000313|EMBL:CCO05195.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1933_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8697..10037)
DNA (1341bp) protein (447aa)
Glycosyl hydrolase family 43 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SW53_9FIRM
Glycoside Hydrolase Family 43 protein / Carbohydrate-Binding Module Family 6 protein
Glycoside Hydrolase Family 43 protein / Carbohydrate-Binding Module Family 6 protein {ECO:0000313|EMBL:CCO05196.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1933_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10294..10770
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZM0_9FIRM
greA; Transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1933_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10808..12379
DNA (1572bp) protein (524aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
lysS; Lysyl-tRNA synthetase, class II (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3N0_9FIRM
L2_026_000M1_scaffold_1933_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12643..13158
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ72903.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
Displaying 11 items

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