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L2_026_000M1_scaffold_3072

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_3072_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..484
DNA (483bp) protein (161aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rsmH; Ribosomal RNA small subunit methyltransferase H (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ71_9FIRM
L2_026_000M1_scaffold_3072_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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558..1034
DNA (477bp) protein (159aa)
Cell division protein FtsL n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9S2_9FIRM
ftsL; Putative cell division protein FtsL
Putative cell division protein FtsL {ECO:0000313|EMBL:CCO04034.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_3072_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1190..3523
DNA (2334bp) protein (778aa)
ftsI; Cell division protein FtsI/PbpB; Transpeptidase (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2M4_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDC66465.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_3072_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3549..4997
DNA (1449bp) protein (483aa)
murE; UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000313|EMBL:CCO04036.1};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF17_9FIRM
L2_026_000M1_scaffold_3072_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5129..6490
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6P1_9FIRM
L2_026_000M1_scaffold_3072_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6487..7530
DNA (1044bp) protein (348aa)
mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ76_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC66468.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_3072_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7555..8403
DNA (849bp) protein (283aa)
Putative cell division protein FtsW n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9S9_9FIRM
Putative cell division protein FtsW {ECO:0000313|EMBL:CDC66469.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ftsW; Cell division protein FtsW
Displaying 7 items

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