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L2_026_000M1_scaffold_3212

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_3212_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..646)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KA33_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS40292.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_026_000M1_scaffold_3212_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(751..945)
DNA (195bp) protein (65aa)
CotJC protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZD0_9FIRM
CotJC protein {ECO:0000313|EMBL:CDC66498.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
cotJC; Spore coat protein JC
L2_026_000M1_scaffold_3212_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(945..1208)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66499.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
cotJB; Spore coat protein JB
L2_026_000M1_scaffold_3212_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1192..1434)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66500.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_026_000M1_scaffold_3212_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1749..2951
DNA (1203bp) protein (401aa)
Receptor family ligand-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF77_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:CDC66501.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
livK; branched-chain amino acid extracellular binding protein
L2_026_000M1_scaffold_3212_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3045..3926
DNA (882bp) protein (294aa)
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6W4_9FIRM
livH; branched-chain amino acid ABC transporter membrane component
Branched-chain amino acid ABC transporter membrane component {ECO:0000313|EMBL:CCO05943.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_3212_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3995..5089
DNA (1095bp) protein (365aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE0_9FIRM
livM; branched-chain amino acid ABC transporter membrane component
Branched-chain amino acid ABC transporter membrane component {ECO:0000313|EMBL:CCO05944.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_3212_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5091..5849
DNA (759bp) protein (253aa)
livG; branched-chain amino acid ABC ATPase component (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9Z9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC66504.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_3212_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5863..6573
DNA (711bp) protein (237aa)
livF; branched-chain amino acid ABC ATPase component (EC:3.6.3.-)
Branched-chain amino acid ABC ATPase component {ECO:0000313|EMBL:CCO05946.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05946.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Amino acid/amide ABC transporter ATP-binding protein 2 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2V7_9FIRM
L2_026_000M1_scaffold_3212_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6586..7197
DNA (612bp) protein (204aa)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF84_9FIRM
hypothetical protein
Cytidylate kinase {ECO:0000313|EMBL:CDC66506.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_3212_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7256..8635)
DNA (1380bp) protein (460aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6W9_9FIRM
hypothetical protein
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:CDC66507.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_3212_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8740..10140)
DNA (1401bp) protein (467aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE4_9FIRM
mgtE2; Magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_3212_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10542..10829
DNA (288bp) protein (96aa)
ahcY; Adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Adenosylhomocysteinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA06_9FIRM
Displaying 13 items

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