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L2_026_000M1_scaffold_1615_1

Organism: dasL2_026_000M1_concoct_38_sub_fa

partial RP 36 / 55 MC: 3 BSCG 40 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 3..572

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma-H factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6Q4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 186.0
  • Bit_score: 354
  • Evalue 6.50e-95
sig5; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 186.0
  • Bit_score: 354
  • Evalue 1.40e-95
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04047.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 186.0
  • Bit_score: 354
  • Evalue 7.00e-95

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
CGGTATTTTTTGAGAGGCGATCGGCAGGATCAGCAGAAAAAGCTTTCAGATGAGCAGCTTGTGCTAAATGCACAGAGTGACAAAACGGCTATCGGTGAGCTTATTGCGAGATATATCTGTACGGTGGAGTTTCTGGCAAAAAAATATGGCGCCGAGGTTCACGAGGATCTTGTCCAAGAGGGGCTTATGGGGCTTCTGGGTGCGGTTAGGACCTATCGTGAAGACAAAAATGCGAAGTTTTCAACTTACGCTACAAAATGTATAAAAAATAAGATCATTTCATCTGTTCACAGAAATGCACTTCTTTCAGGCGGCGAGGAAGCTGTCCTTGAGGCTATTCTTGGCGGCGGTGGCACTGTACCTGAGGAGGTCGTAGTGGAGCGTGAGGAGCTGAATGAGCTTTATGATAAGATCACTTCTGCACTTTCGGAGCAGGAGTGGCAGGTATTTCAATCGTTTTTGAGAGGAATGTCATACAATCAGATAGCATTAGGCTTGGGCACGTCGGAAAAGGCGGTAGACAATGCAATGCAGAGAGTCAGACGGAAATTGAGATCACTGTTGAGATAG
PROTEIN sequence
Length: 190
RYFLRGDRQDQQKKLSDEQLVLNAQSDKTAIGELIARYICTVEFLAKKYGAEVHEDLVQEGLMGLLGAVRTYREDKNAKFSTYATKCIKNKIISSVHRNALLSGGEEAVLEAILGGGGTVPEEVVVEREELNELYDKITSALSEQEWQVFQSFLRGMSYNQIALGLGTSEKAVDNAMQRVRRKLRSLLR*