ggKbase home page

L2_026_000M1_scaffold_1615

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1615_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..572
DNA (570bp) protein (190aa)
Putative RNA polymerase sigma-H factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6Q4_9FIRM
sig5; RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04047.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1615_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

669..947
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04048.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1615_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(998..1822)
DNA (825bp) protein (275aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9U2_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC66479.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
transcriptional regulator, AraC family
L2_026_000M1_scaffold_1615_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1923..4925
DNA (3003bp) protein (1001aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
lacZ; Beta-galactosidase (Glycoside Hydrolase Family 2 protein ) (EC:3.2.1.23)
Glycoside hydrolase family 2 TIM barrel n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P2_9FIRM
L2_026_000M1_scaffold_1615_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4936..8421
DNA (3486bp) protein (1162aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF28_9FIRM
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDC66481.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
glycoside hydrolase family protein
L2_026_000M1_scaffold_1615_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8459..9433)
DNA (975bp) protein (325aa)
cbaH; Choloylglycine hydrolase (EC:3.5.1.24)
Penicillin V acylase and related amidases n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6R1_9FIRM
Penicillin V acylase and related amidases {ECO:0000313|EMBL:CDC66482.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1615_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9606..11186
DNA (1581bp) protein (527aa)
cls1; Cardiolipin synthase (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66483.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1615_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11478..12908
DNA (1431bp) protein (477aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9V0_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
mgtE1; Magnesium transporter
L2_026_000M1_scaffold_1615_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13003..14055)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66485.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_026_000M1_scaffold_1615_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14310..14846
DNA (537bp) protein (179aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF33_9FIRM
sig6; RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04057.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_026_000M1_scaffold_1615_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14839..15444
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66487.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
Displaying 11 items

View Taxonomy