ggKbase home page

L2_026_000M1_scaffold_5282

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_5282_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

129..746
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90194.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_026_000M1_scaffold_5282_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

746..1096
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23340.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted transcriptional regulators
L2_026_000M1_scaffold_5282_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1119..2078)
DNA (960bp) protein (320aa)
ldhD; D-lactate dehydrogenase LdhD (EC:1.1.1.28)
D-lactate dehydrogenase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ13_9FIRM
D-lactate dehydrogenase {ECO:0000313|EMBL:CCZ24296.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_026_000M1_scaffold_5282_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2081..3505)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24297.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_026_000M1_scaffold_5282_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3561..4448
DNA (888bp) protein (296aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJI3_CLODI
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQF26695.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
LysR family transcriptional regulator
L2_026_000M1_scaffold_5282_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4550..4828
DNA (279bp) protein (93aa)
Phosphotransferase system n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q443_9FIRM
Phosphotransferase system {ECO:0000313|EMBL:CCZ23283.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cellobiose-specific PTS system IIB component
L2_026_000M1_scaffold_5282_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4913..5065
DNA (153bp) protein (51aa)
Ribose ABC superfamily ATP binding cassette transporter binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA98_9FIRM
Ribose ABC superfamily ATP binding cassette transporter binding protein {ECO:0000313|EMBL:CCZ23284.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying 7 items

View Taxonomy