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L2_026_000M1_scaffold_2602

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_2602_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..253
DNA (252bp) protein (84aa)
4Fe-4S binding domain-containing protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9S9_9FIRM
4Fe-4S binding domain-containing protein {ECO:0000313|EMBL:CCZ23094.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
(4Fe-4S)-binding protein
L2_026_000M1_scaffold_2602_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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247..1767
DNA (1521bp) protein (507aa)
ABC transporter, substrate-binding protein, QAT family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EF19_9CLOT
ABC transporter, substrate-binding protein, QAT family {ECO:0000313|EMBL:EEG29921.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
osmoprotectant ABC transporter substrate-binding/permease
L2_026_000M1_scaffold_2602_3
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1770..2504
DNA (735bp) protein (245aa)
ABC transporter, ATP-binding protein n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1Y391_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI05376.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
glycine/betaine ABC transporter ATP-binding protein
L2_026_000M1_scaffold_2602_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2495..2824)
DNA (330bp) protein (110aa)
Transcriptional regulator, HxlR family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56208.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulatory protein
L2_026_000M1_scaffold_2602_5

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2905..3498
DNA (594bp) protein (198aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZSD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17929.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_2602_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3499..4272
DNA (774bp) protein (258aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQ71_9FIRM
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 {ECO:0000313|EMBL:CBL22929.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_026_000M1_scaffold_2602_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4223..5083
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QN35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23586.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_026_000M1_scaffold_2602_8
unknown

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comp(5191..5295)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_026_000M1_scaffold_2602_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5531..5899
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23092.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_026_000M1_scaffold_2602_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6161..6535
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24011.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_026_000M1_scaffold_2602_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6591..6878)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23089.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_026_000M1_scaffold_2602_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7125..8558
DNA (1434bp) protein (478aa)
thiED; putative thiamine-phosphate pyrophosphorylase/hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC:2.5.1.3 2.7.1.49 2.7.4.7)
Thiamine-phosphate synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ26_9FIRM
Thiamine-phosphate synthase {ECO:0000313|EMBL:CCZ23087.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_026_000M1_scaffold_2602_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8603..9757
DNA (1155bp) protein (385aa)
maeB; NADP-dependent malic enzyme MaeB (EC:1.1.1.40)
Putative NAD-dependent malic enzyme n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9S3_9FIRM
Putative NAD-dependent malic enzyme {ECO:0000313|EMBL:CCZ23084.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying 13 items

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