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L2_026_000M1_scaffold_3513

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_3513_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..613
DNA (612bp) protein (204aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQC4_9FIRM
L2_026_000M1_scaffold_3513_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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598..1677
DNA (1080bp) protein (360aa)
RIP metalloprotease RseP (EC:3.4.24.-)
RIP metalloprotease RseP n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3Y1_9FIRM
RIP metalloprotease RseP {ECO:0000313|EMBL:CCZ23213.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_026_000M1_scaffold_3513_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1743..6059
DNA (4317bp) protein (1439aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
polC; DNA polymerase III PolC (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA10_9FIRM
L2_026_000M1_scaffold_3513_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6160..6627
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q334_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_026_000M1_scaffold_3513_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6640..7422
DNA (783bp) protein (261aa)
Transcription termination-antitermination factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QLZ6_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
nusA; transcription elongation protein NusA
Displaying 5 items

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