ggKbase home page

L2_026_000M1_scaffold_224_10

Organism: dasL2_026_000M1_concoct_73_fa

near complete RP 44 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 7597..9087

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP56_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 496.0
  • Bit_score: 975
  • Evalue 1.20e-281
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 496.0
  • Bit_score: 975
  • Evalue 1.70e-281
rpoN; RNA polymerase factor sigma-54 similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 516.0
  • Bit_score: 422
  • Evalue 1.10e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum sp. CAG:260 → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
ATGGCTCTGACGCCCAAAATAGAAATCAAGCAATCGCAGTCATTACTGATGACTCCGCAGCTGCGGCAGGCCATTAATCTGTTGCAAATGTCCAATTTGGAATTGGGCGAACTGGTCTCCAAAGAACTGGAAACCAATCCTTTTCTTGAAAGAGAAGACGAGCGCCTCAACGACAGCCTGCCGCATGAACAAACCATAGACGACTACGATGCGCCACAGGAAGCACCGAACCCGCAAGATGAAACACCCGATATTGACTATGACAACAGCTTCGACGATGATTTCGGCAGTGACCGTGAAGGATACGAAGTCGGACAGGACGCTGACTGGCGGGATTATCTGCCTCCGGGCAAAACGGGAACTGATGATGACTTTAACTATTTTGAACAGCGTCTCCCCGCGGAAAAATCCCTCTACCGCTATCTTGACGAACAGATTCTGCTCACCTTTGCCACAGCCCGGGAAAGGATTATTGCGGCCCGCCTGACCGAATTTCTTGACGCGGCCGGATATTTTCGCGGCGACTGCACCGCCATAGCCAAACAGCTGCAAATTAAAGAAAGCGAAGTAAAAAAGATTCTGTCCCGGCTCCAAACTTTTGAACCTTCCGGCATTTTTGCCGTCTCTCTCGCCGAATGTCTGGCCATTCAGCTCAAAGACCGCGGCCGTTTCGACCCCTATATGGAATTTCTGCTCGACCACCTTGACCTGGTTGCCGAACGCAAATTCAAAGAGTTGAAGAAACTCGGCAATCTGACTGACGAAGATTTAAGCTCCATGCTGGCAGACATCAGAGCACTGAACCCCAAACCGGCAGCAGGTTTTGCCAATGACCTGACCGGCTATGTTATTCCCGATGTCTTTGTCAAAACCAACAAATACGGTGAATATTTAATCGAACTTAATGCCCGCTCTCTGCCCAGAGTTCTGATTAACCGCGAATACTACAGCGAAATAAAAAACCTCAGTTCACAAAACAAAGAAGCCAAACGTTATTTGAAAGACCGTCTCAGCTCGGCCGGTTTTTTGGTCAGGGCGCTTCACCAGCGAGCCGCGACAATTCTGCGCGTTGCCGAAGAAATCGTCAGACATCAGCGCGACTTTTTCGAAAAAGGAATTGAATTTATCAAACCGCTGCTGCTGCGCGACGTTGCCGACGCCCTTGAAATGCACGAAAGCACCGTCAGCCGCGTTACCAGCGGCAAATATATGCACACCCCGCGCGGTATTTTTGAATTGAAATACTTTTTCTCGGCTGCCGCCGGAACCTACACCGGTGACGAGAACACCTCGGTTACCGCCATCAAACACCGTATCAAACAACTGACCGACGAAGAAAAACCCGACAACATTCTCTCCGACGATATGATTGTCGAATGTCTGGCCCGGCAGGGCATAAAAATCGCCCGCCGCACGGTAGCAAAATACCGCGAAGGAATGGGCATTCCCACTTCCGGACAAAGGAAACGCCTTAAACGCTCGGCCTTTTAA
PROTEIN sequence
Length: 497
MALTPKIEIKQSQSLLMTPQLRQAINLLQMSNLELGELVSKELETNPFLEREDERLNDSLPHEQTIDDYDAPQEAPNPQDETPDIDYDNSFDDDFGSDREGYEVGQDADWRDYLPPGKTGTDDDFNYFEQRLPAEKSLYRYLDEQILLTFATARERIIAARLTEFLDAAGYFRGDCTAIAKQLQIKESEVKKILSRLQTFEPSGIFAVSLAECLAIQLKDRGRFDPYMEFLLDHLDLVAERKFKELKKLGNLTDEDLSSMLADIRALNPKPAAGFANDLTGYVIPDVFVKTNKYGEYLIELNARSLPRVLINREYYSEIKNLSSQNKEAKRYLKDRLSSAGFLVRALHQRAATILRVAEEIVRHQRDFFEKGIEFIKPLLLRDVADALEMHESTVSRVTSGKYMHTPRGIFELKYFFSAAAGTYTGDENTSVTAIKHRIKQLTDEEKPDNILSDDMIVECLARQGIKIARRTVAKYREGMGIPTSGQRKRLKRSAF*