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L2_026_000M1_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_224_1
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
elongation factor Tu n=1 Tax=alpha proteobacterium L41A RepID=UPI00037759B8
translation elongation factor Tu (EF-TU)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
L2_026_000M1_scaffold_224_2
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257..2332)
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZS2_9PROT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
fusA; Elongation factor G (EF-G)
L2_026_000M1_scaffold_224_3
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2351..2821)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRU2_9PROT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
rpsG; 30S ribosomal protein S7
L2_026_000M1_scaffold_224_4
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2834..3205)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J6G4_9PROT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
30S ribosomal protein S12
L2_026_000M1_scaffold_224_5
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3627..4070)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP51_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39777.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_224_6
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4274..5239
DNA (966bp) protein (322aa)
kdsD; Arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HPH7_9PROT
Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CDB39778.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_224_7
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5241..5912
DNA (672bp) protein (224aa)
Conserved uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZS7_9PROT
Conserved uncharacterized protein {ECO:0000313|EMBL:CDB39779.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
conserved protein of unknown function
L2_026_000M1_scaffold_224_8
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5912..6820
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRU7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39780.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L2_026_000M1_scaffold_224_9
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6830..7576
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2Y6_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB39781.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
ABC transporter ATP-binding protein
L2_026_000M1_scaffold_224_10
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7597..9087
DNA (1491bp) protein (497aa)
RNA polymerase sigma-54 factor n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP56_9PROT
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
rpoN; RNA polymerase factor sigma-54
L2_026_000M1_scaffold_224_11
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9204..9770
DNA (567bp) protein (189aa)
Sigma 54 modulation protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HPI1_9PROT
Sigma 54 modulation protein {ECO:0000313|EMBL:CDB39783.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
putative sigma (54) modulation protein
L2_026_000M1_scaffold_224_12
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9799..10242
DNA (444bp) protein (148aa)
Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZT2_9PROT
Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein {ECO:0000313|EMBL:CDB39784.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
ptsN; phosphotransferase system mannitol/fructose-specific IIA domain-containing protein
L2_026_000M1_scaffold_224_13
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10327..10563)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRV2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39785.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_224_14
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10667..12340
DNA (1674bp) protein (558aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2Z0_9PROT
two-component system sensor histidine kinase
L2_026_000M1_scaffold_224_15
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12412..12633
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Proteobacteria RepID=R5QQS7_9PROT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
infA; translation initiation factor IF-1
L2_026_000M1_scaffold_224_16
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12669..13283)
DNA (615bp) protein (205aa)
DedA family protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HPI7_9PROT
DedA family protein {ECO:0000313|EMBL:CDB39788.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
DedA family protein
L2_026_000M1_scaffold_224_17
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13332..13964)
DNA (633bp) protein (211aa)
Signal transduction histidine kinase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZT5_9PROT
Signal transduction histidine kinase {ECO:0000313|EMBL:CDB39789.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
signal transduction histidine kinase
L2_026_000M1_scaffold_224_18
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14029..14871)
DNA (843bp) protein (281aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRV6_9PROT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_224_19
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14876..15181)
DNA (306bp) protein (102aa)
UPF0235 protein BN570_00175 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2Z4_9PROT
UPF0235 protein BN570_00175 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
yggU; hypothetical protein
L2_026_000M1_scaffold_224_20
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15324..15623)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP69_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39792.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
membrane protein
L2_026_000M1_scaffold_224_21
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15702..16808)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HPJ2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39793.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_224_22
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16833..17279)
DNA (447bp) protein (149aa)
Conserved domain protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZU1_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDB39794.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_026_000M1_scaffold_224_23
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17466..18821
DNA (1356bp) protein (452aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRW1_9PROT
miaB; isopentenyl-adenosine A37 tRNA methylthiolase
L2_026_000M1_scaffold_224_24
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18835..19800
DNA (966bp) protein (322aa)
PhoH-like protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2Z6_9PROT
PhoH-like protein {ECO:0000313|EMBL:CDB39796.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
ybeZ; putative enzyme with nucleoside triphosphate hydrolase domain
L2_026_000M1_scaffold_224_25
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19793..20311
DNA (519bp) protein (173aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
Endoribonuclease YbeY n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP74_9PROT
protein of unknown function UPF0054
L2_026_000M1_scaffold_224_26
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20315..21850
DNA (1536bp) protein (512aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
Apolipoprotein N-acyltransferase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HPJ8_9PROT
apolipoprotein N-acyltransferase
L2_026_000M1_scaffold_224_27
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21988..22494
DNA (507bp) protein (169aa)
Transcriptional regulators n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZU7_9PROT
Transcriptional regulators {ECO:0000313|EMBL:CDB39799.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L2_026_000M1_scaffold_224_28
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22582..23736
DNA (1155bp) protein (385aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRW7_9PROT
L2_026_000M1_scaffold_224_29
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23727..24452
DNA (726bp) protein (242aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I301_9PROT
tRNA (guanine-N(7)-)-methyltransferase
L2_026_000M1_scaffold_224_30
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24466..24972)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6IP79_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39802.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
Displaying items 1-30 of 67 in total

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