ggKbase home page

L2_026_000M1_scaffold_1259

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1259_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(336..1010)
DNA (675bp) protein (225aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K164_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL00013.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1033..1470)
DNA (438bp) protein (146aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor {ECO:0000313|EMBL:CBL00012.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CBL00012.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Anti-sigma F factor n=2 Tax=root RepID=D4K163_9FIRM
L2_026_000M1_scaffold_1259_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1472..1798)
DNA (327bp) protein (109aa)
Anti-sigma factor antagonist n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K162_9FIRM
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1885..3156)
DNA (1272bp) protein (424aa)
Folylpolyglutamate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K161_9FIRM
Folylpolyglutamate synthase
Folylpolyglutamate synthase {ECO:0000313|EMBL:CBL00010.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3161..3691)
DNA (531bp) protein (177aa)
Predicted integral membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K160_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL00009.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3691..6396)
DNA (2706bp) protein (902aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Valine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K159_9FIRM
L2_026_000M1_scaffold_1259_7
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6747..7736)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7B211_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC55875.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
glycosyl transferase
L2_026_000M1_scaffold_1259_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7750..7968)
DNA (219bp) protein (73aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDP21365.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDP21365.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Faecalibacterium prausnitzii RepID=D4K7S0_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L2_026_000M1_scaffold_1259_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7970..9499)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K158_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00007.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9571..11367)
DNA (1797bp) protein (599aa)
Methionine synthase I (cobalamin-dependent), methyltransferase domain (EC:2.1.1.13)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Methylenetetrahydrofolate reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K157_9FIRM
L2_026_000M1_scaffold_1259_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11566..12174
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q261_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30818.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Acetyltransferases, including N-acetylases of ribosomal proteins
L2_026_000M1_scaffold_1259_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12171..13436
DNA (1266bp) protein (422aa)
GTPase HflX n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCK0_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
GTPases
L2_026_000M1_scaffold_1259_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13502..13891)
DNA (390bp) protein (130aa)
Mn-dependent transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K152_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBL00001.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13992..14168)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K151_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00000.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14205..16397)
DNA (2193bp) protein (731aa)
Ferrous iron transporter FeoB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K150_9FIRM
ferrous iron transporter FeoB
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBK99999.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16423..16644)
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K149_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBK99998.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16729..16944)
DNA (216bp) protein (72aa)
Fe2+ transport system protein A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K148_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBK99997.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17381..17959)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K147_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99996.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_1259_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18234..18809
DNA (576bp) protein (192aa)
Uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000313|EMBL:CBK99995.1}; EC=2.7.1.48 {ECO:0000313|EMBL:CBK99995.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Uridine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K146_9FIRM
Displaying 19 items

View Taxonomy