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L2_026_000M1_scaffold_603

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_603_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
UPF0109 protein FP2_26630 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K119_9FIRM
RNA-binding protein (KH domain)
UPF0109 protein FP2_26630 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(191..433)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K118_9FIRM
SSU ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(520..1875)
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K117_9FIRM
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1903..2286)
DNA (384bp) protein (128aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K116_9FIRM
hypothetical protein
UPF0122 protein FP2_26600 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2512..3420
DNA (909bp) protein (303aa)
cysteine synthase (EC:2.5.1.47)
Pyridoxal-phosphate dependent protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q6F6_9FIRM
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:CDC28564.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_026_000M1_scaffold_603_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3453..4781
DNA (1329bp) protein (443aa)
Putative efflux protein, MATE family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K115_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK99964.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4833..5657)
DNA (825bp) protein (275aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K103_9FIRM
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:CBK99952.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5659..6588)
DNA (930bp) protein (310aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K102_9FIRM
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:CBK99951.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6619..7716)
DNA (1098bp) protein (366aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K101_9FIRM
ABC-type uncharacterized transport system, periplasmic component
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:CBK99950.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8166..8999)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K100_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99949.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8993..9694)
DNA (702bp) protein (234aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z9_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK99948.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9687..10067)
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z8_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK99947.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10218..11216
DNA (999bp) protein (333aa)
Predicted glycosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z7_9FIRM
Predicted glycosyltransferases
Predicted glycosyltransferases {ECO:0000313|EMBL:CBK99946.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_14
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11282..11845)
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZK4_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73157.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_026_000M1_scaffold_603_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11913..12266)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZK5_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06231.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_026_000M1_scaffold_603_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12487..13359)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99945.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13629..13970)
DNA (342bp) protein (114aa)
Arsenate reductase and related proteins, glutaredoxin family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z5_9FIRM
Arsenate reductase and related proteins, glutaredoxin family
Arsenate reductase and related proteins, glutaredoxin family {ECO:0000313|EMBL:CBK99944.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14108..14293
DNA (186bp) protein (62aa)
Ferredoxin n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z4_9FIRM
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:CBK99943.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14704..17289
DNA (2586bp) protein (862aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460, ECO:0000313|EMBL:CBK99942.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA polymerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z3_9FIRM
L2_026_000M1_scaffold_603_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17294..18301
DNA (1008bp) protein (336aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z2_9FIRM
L2_026_000M1_scaffold_603_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18339..19184)
DNA (846bp) protein (282aa)
CAAX amino terminal protease family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z1_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBK99940.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_603_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20032..21111
DNA (1080bp) protein (360aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:CBK99939.1}; EC=2.7.1.11 {ECO:0000313|EMBL:CBK99939.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
6-phosphofructokinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z0_9FIRM
L2_026_000M1_scaffold_603_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21246..22082
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H629_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96615.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
conserved hypothetical protein (putative transposase or invertase)
L2_026_000M1_scaffold_603_24
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(22136..22456)
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AGU6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX40142.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Helix-turn-helix.
L2_026_000M1_scaffold_603_25
unknown

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22593..23273
DNA (681bp) protein (227aa)

This feature has no annotations

L2_026_000M1_scaffold_603_26

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23286..23630
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:AHF24877.1}; TaxID=1393535 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig21.;"
L2_026_000M1_scaffold_603_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23718..24782)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBK99963.1}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBK99963.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K114_9FIRM
L2_026_000M1_scaffold_603_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25156..26073)
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBK99962.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBK99962.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K113_9FIRM
L2_026_000M1_scaffold_603_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26090..26977)
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBK99961.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBK99961.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K112_9FIRM
L2_026_000M1_scaffold_603_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27238..28029)
DNA (792bp) protein (264aa)
Glycosyltransferase group 2 family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCZ0_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC30939.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted glycosyltransferases
Displaying items 1-30 of 40 in total

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