ggKbase home page

L2_026_000M1_scaffold_632

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_632_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..576)
-----------------
DNA (576bp)
protein (192aa)
Peptide chain release factor 3 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ0_9FIRM
bacterial peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_026_000M1_scaffold_632_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(727..1584)
-----------------
DNA (858bp)
protein (286aa)
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI9_9FIRM
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis {ECO:0000313|EMBL:CBK98738.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1774..3192
-----------------
DNA (1419bp)
protein (473aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (EC:1.3.1.74)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK98736.1}; EC=1.3.1.74 {ECO:0000313|EMBL:CBK98736.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI7_9FIRM
L2_026_000M1_scaffold_632_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3269..5218)
-----------------
DNA (1950bp)
protein (650aa)
Pullulanase, type I n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI6_9FIRM
Pullulanase, type I {ECO:0000313|EMBL:CBK98735.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
pullulanase, type I
L2_026_000M1_scaffold_632_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5355..7376
-----------------
DNA (2022bp)
protein (674aa)
ATPases of the AAA+ class n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI5_9FIRM
ATPases of the AAA+ class {ECO:0000313|EMBL:CBK98734.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ATPases of the AAA+ class
L2_026_000M1_scaffold_632_6
unknown

Not on your lists

7500..8138
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

L2_026_000M1_scaffold_632_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8196..8996)
-----------------
DNA (801bp)
protein (267aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK98733.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9247..10656)
-----------------
DNA (1410bp)
protein (470aa)
Uncharacterized FAD-dependent dehydrogenases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI3_9FIRM
Uncharacterized FAD-dependent dehydrogenases
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CBK98732.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10979..11680)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI2_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK98731.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11716..13119)
-----------------
DNA (1404bp)
protein (468aa)
MATE efflux family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJY8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFQ06530.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_026_000M1_scaffold_632_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13252..13860)
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98730.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13915..15273)
-----------------
DNA (1359bp)
protein (453aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98729.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15307..16137)
-----------------
DNA (831bp)
protein (277aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH9_9FIRM
Protein of unknown function, DUF624.
Uncharacterized protein {ECO:0000313|EMBL:CBK98728.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16365..17090
-----------------
DNA (726bp)
protein (242aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZ02_9FIRM
L2_026_000M1_scaffold_632_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17117..17881
-----------------
DNA (765bp)
protein (255aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98727.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17885..18049
-----------------
DNA (165bp)
protein (55aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98726.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18243..19313
-----------------
DNA (1071bp)
protein (357aa)
monofunctional chorismate mutase, gram positive-type, clade 2 (EC:4.2.1.51)
Monofunctional chorismate mutase, gram positive-type, clade 2 {ECO:0000313|EMBL:CBK98725.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CBK98725.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Monofunctional chorismate mutase, gram positive-type, clade 2 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH6_9FIRM
L2_026_000M1_scaffold_632_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19310..20353
-----------------
DNA (1044bp)
protein (348aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
3-dehydroquinate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH5_9FIRM
L2_026_000M1_scaffold_632_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20357..21499
-----------------
DNA (1143bp)
protein (381aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Chorismate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH4_9FIRM
L2_026_000M1_scaffold_632_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21499..22761
-----------------
DNA (1263bp)
protein (421aa)
Shikimate 5-dehydrogenase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH3_9FIRM
Shikimate 5-dehydrogenase
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:CBK98722.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22742..23206
-----------------
DNA (465bp)
protein (155aa)
3-dehydroquinate dehydratase II (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000313|EMBL:CBK98721.1};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
3-dehydroquinate dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH2_9FIRM
L2_026_000M1_scaffold_632_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23240..24256
-----------------
DNA (1017bp)
protein (339aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:CBK98720.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBK98720.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH1_9FIRM
L2_026_000M1_scaffold_632_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24410..25687
-----------------
DNA (1278bp)
protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH0_9FIRM
L2_026_000M1_scaffold_632_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25677..26537
-----------------
DNA (861bp)
protein (287aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:CBK98718.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CBK98718.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Prephenate dehydrogenase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG9_9FIRM
L2_026_000M1_scaffold_632_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26555..27520
-----------------
DNA (966bp)
protein (322aa)
Predicted transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG8_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK98717.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27583..28791)
-----------------
DNA (1209bp)
protein (403aa)
aminotransferase (EC:4.4.1.8)
Aminotransferase class I/II n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9D4_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDC29644.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_026_000M1_scaffold_632_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28857..29318)
-----------------
DNA (462bp)
protein (154aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBK98716.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG7_9FIRM
L2_026_000M1_scaffold_632_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29466..30254)
-----------------
DNA (789bp)
protein (263aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98715.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30233..31591)
-----------------
DNA (1359bp)
protein (453aa)
Predicted DNA-binding protein with the Helix-hairpin-helix motif n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG5_9FIRM
Predicted DNA-binding protein with the Helix-hairpin-helix motif
Predicted DNA-binding protein with the Helix-hairpin-helix motif {ECO:0000313|EMBL:CBK98714.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_632_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31662..32294)
-----------------
DNA (633bp)
protein (211aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG4_9FIRM
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CBK98713.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 30 items

View Taxonomy