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L2_026_000M1_scaffold_939

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_939_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41..244
DNA (204bp) protein (68aa)
UPF0291 protein FP2_23020 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K041_9FIRM
hypothetical protein
UPF0291 protein FP2_23020 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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441..1736
DNA (1296bp) protein (432aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKI7_9FIRM
L2_026_000M1_scaffold_939_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1771..2673
DNA (903bp) protein (301aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K039_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBK99638.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2742..4058)
DNA (1317bp) protein (439aa)
CBS domain pair n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QJ32_9FIRM
CBS domain pair {ECO:0000313|EMBL:CDC30901.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Hemolysins and related proteins containing CBS domains
L2_026_000M1_scaffold_939_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4238..6850)
DNA (2613bp) protein (871aa)
ATP-dependent chaperone ClpB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K038_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ATP-dependent chaperone ClpB
L2_026_000M1_scaffold_939_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7106..8038)
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBK99636.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Cysteine synthase A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K037_9FIRM
L2_026_000M1_scaffold_939_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8316..8747
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K036_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBK99635.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8815..9954)
DNA (1140bp) protein (380aa)
Trigger factor n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q429_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
trigger factor
L2_026_000M1_scaffold_939_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10176..11348
DNA (1173bp) protein (391aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme NAD binding domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QBR3_9FIRM
Malic enzyme NAD binding domain protein {ECO:0000313|EMBL:CDC30489.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_026_000M1_scaffold_939_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11364..12203
DNA (840bp) protein (280aa)
fumarase alpha subunit (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAW0_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EEU94943.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_026_000M1_scaffold_939_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12468..13025
DNA (558bp) protein (186aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region {ECO:0000313|EMBL:CBK99631.1}; EC=4.2.1.2 {ECO:0000313|EMBL:CBK99631.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K032_9FIRM
L2_026_000M1_scaffold_939_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13074..13574
DNA (501bp) protein (167aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAV6_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EEU94939.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Mn-dependent transcriptional regulator
L2_026_000M1_scaffold_939_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13688..14038)
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
mRNA interferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K030_9FIRM
Growth inhibitor
L2_026_000M1_scaffold_939_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14176..14583)
DNA (408bp) protein (136aa)
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K029_9FIRM
L2_026_000M1_scaffold_939_15
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14725..14979
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30483.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_026_000M1_scaffold_939_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15028..15969)
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CBK99627.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA-dihydrouridine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K028_9FIRM
tRNA-dihydrouridine synthase
L2_026_000M1_scaffold_939_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16152..17852
DNA (1701bp) protein (567aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K517_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase {ECO:0000313|EMBL:CBK98610.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17856..18632
DNA (777bp) protein (259aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K518_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CBK98611.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18770..19858
DNA (1089bp) protein (363aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K519_9FIRM
ABC-type Fe3+ transport system, periplasmic component
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:CBK98612.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19883..20971
DNA (1089bp) protein (363aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.30)
ABC-type spermidine/putrescine transport systems, ATPase components {ECO:0000313|EMBL:CBK98613.1}; EC=3.6.3.30 {ECO:0000313|EMBL:CBK98613.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type spermidine/putrescine transport systems, ATPase components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K520_9FIRM
L2_026_000M1_scaffold_939_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20958..22613
DNA (1656bp) protein (552aa)
ABC-type Fe3+ transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K521_9FIRM
ABC-type Fe3+ transport system, permease component
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:CBK98614.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_939_22
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(22729..23166)
DNA (438bp) protein (146aa)
Predicted transcriptional regulators n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZL1_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDB87571.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Predicted transcriptional regulators
L2_026_000M1_scaffold_939_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23288..23533)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95649.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_026_000M1_scaffold_939_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23550..23753)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95650.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_026_000M1_scaffold_939_25
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(24041..24199)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BKG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66037.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
L2_026_000M1_scaffold_939_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24486..24965)
DNA (480bp) protein (160aa)
Large conductance mechanosensitive channel protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PYV8_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
large conductance mechanosensitive channel protein
L2_026_000M1_scaffold_939_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25061..26752)
DNA (1692bp) protein (564aa)
Oligoendopeptidase, M3 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYA8_9FIRM
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:CBK99007.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
oligoendopeptidase, M3 family
L2_026_000M1_scaffold_939_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27178..27693
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYA9_9FIRM
Protein of unknown function (DUF1393).
Uncharacterized protein {ECO:0000313|EMBL:CBK99008.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 28 items

View Taxonomy