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L2_026_000M1_scaffold_1300

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1300_1
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
50S ribosomal protein L15 n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX40_9DELT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
rplO; 50S ribosomal protein L15
L2_026_000M1_scaffold_1300_2
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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482..1795
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX41_9DELT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
secY; preprotein translocase subunit SecY
L2_026_000M1_scaffold_1300_3
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1821..2615
DNA (795bp) protein (265aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Methionine aminopeptidase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX42_9DELT
methionine aminopeptidase
L2_026_000M1_scaffold_1300_4
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2765..2878
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=Desulfovibrionaceae RepID=RL36_DESDA
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L2_026_000M1_scaffold_1300_5
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2894..3262
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B5C5D7
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
L2_026_000M1_scaffold_1300_6
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3308..3697
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX44_9DELT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
30S ribosomal protein S11
L2_026_000M1_scaffold_1300_7
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3745..4371
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=2 Tax=Bacteria RepID=B6WX45_9DELT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
rpsD; 30S ribosomal protein S4
L2_026_000M1_scaffold_1300_8
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4383..5426
DNA (1044bp) protein (348aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX46_9DELT
DNA-directed RNA polymerase subunit alpha
L2_026_000M1_scaffold_1300_9
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5416..5820
DNA (405bp) protein (135aa)
50S ribosomal protein L17 n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX47_9DELT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
rplQ; 50S ribosomal protein L17
L2_026_000M1_scaffold_1300_10
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6555..7568
DNA (1014bp) protein (338aa)
Selenide, water dikinase {ECO:0000313|EMBL:EEB32495.1}; EC=2.7.9.3 {ECO:0000313|EMBL:EEB32495.1};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Selenide, water dikinase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX50_9DELT
selenide, water dikinase
L2_026_000M1_scaffold_1300_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8100..9146)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UXI4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49678.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
phage HP1 integrase
L2_026_000M1_scaffold_1300_12
unknown

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comp(9151..9306)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_026_000M1_scaffold_1300_13
Rhodococcus phage RGL3, L5likevirus, Caudovirales, Viruses

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comp(9489..10055)
DNA (567bp) protein (189aa)
Antirestriction protein n=1 Tax=Rhodococcus phage RGL3 RepID=G9FHQ1_9CAUD
Antirestriction protein {ECO:0000313|EMBL:AEV52139.1}; TaxID=1109716 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; L5likevirus.;" source="Rhodococcus phage RGL3.;"
antirestriction protein
L2_026_000M1_scaffold_1300_14
unknown

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comp(10070..10204)
DNA (135bp) protein (45aa)

This feature has no annotations

L2_026_000M1_scaffold_1300_15
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10206..10976)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B571_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF47546.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis DNF00314.;"
L2_026_000M1_scaffold_1300_16
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11069..12526)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C371CE
Uncharacterized protein {ECO:0000313|EMBL:EKU78750.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
LIM zinc-binding protein
L2_026_000M1_scaffold_1300_17
unknown

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comp(13634..14122)
DNA (489bp) protein (163aa)

This feature has no annotations

L2_026_000M1_scaffold_1300_18
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14688..16568)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YB51_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV42747.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
phage-related DNA maturase
L2_026_000M1_scaffold_1300_19
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16650..16907)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UXH3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49667.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L2_026_000M1_scaffold_1300_20
unknown

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17087..17176
DNA (90bp) protein (30aa)

This feature has no annotations

L2_026_000M1_scaffold_1300_21
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17385..17705)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YB53_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV42749.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L2_026_000M1_scaffold_1300_22
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17705..17974)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UVQ5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50305.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L2_026_000M1_scaffold_1300_23
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17977..18651)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UVQ4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50304.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
Displaying 23 items

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