ggKbase home page

L2_026_000M1_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_385_1
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1023)
DNA (1023bp) protein (341aa)
Protein translocase subunit SecA n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTM2_9DELT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
preprotein translocase subunit SecA
L2_026_000M1_scaffold_385_2
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1609..1977)
DNA (369bp) protein (123aa)
Putative molybdopterin converting factor, subunit 2 n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTM3_9DELT
Putative molybdopterin converting factor, subunit 2 {ECO:0000313|EMBL:EEB33715.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_3
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2210..2554
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTM5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33717.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2880..3854)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UVI3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50410.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
tol-pal system protein YbgF
L2_026_000M1_scaffold_385_5
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3874..4074)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTM8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33619.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_6
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4071..4571)
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTM9_9DELT
L2_026_000M1_scaffold_385_7
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4571..7390)
DNA (2820bp) protein (940aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Isoleucine--tRNA ligase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN0_9DELT
ileS; isoleucyl-tRNA synthetase
L2_026_000M1_scaffold_385_8
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7716..7967)
DNA (252bp) protein (84aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN2_9DELT
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:EEB33623.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hydrogenase assembly chaperone HypC/HupF
L2_026_000M1_scaffold_385_9
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7984..8481)
DNA (498bp) protein (166aa)
Putative hydrogenase expression/formation protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN3_9DELT
Putative hydrogenase expression/formation protein {ECO:0000313|EMBL:EEB33624.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hydrogenase maturation protease
L2_026_000M1_scaffold_385_10
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8781..8936)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33625.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_11
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8952..10166)
DNA (1215bp) protein (405aa)
Polysulfide reductase, NrfD n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN5_9DELT
Polysulfide reductase, NrfD {ECO:0000313|EMBL:EEB33626.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
polysulfide reductase NrfD
L2_026_000M1_scaffold_385_12
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10167..11288)
DNA (1122bp) protein (374aa)
Tat pathway signal sequence domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN6_9DELT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEB33627.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
4Fe-4S ferredoxin
L2_026_000M1_scaffold_385_13
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11304..12290)
DNA (987bp) protein (329aa)
Nine-heme cytochrome C n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN7_9DELT
Nine-heme cytochrome C {ECO:0000313|EMBL:EEB33628.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
cytochrome c class III
L2_026_000M1_scaffold_385_14
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12776..13690)
DNA (915bp) protein (305aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTN9_9DELT
L2_026_000M1_scaffold_385_15
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13692..14234)
DNA (543bp) protein (181aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP0_9DELT
L2_026_000M1_scaffold_385_16
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14231..14782)
DNA (552bp) protein (184aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EEB33632.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEB33632.1};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
RNA methyltransferase, RsmD family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP1_9DELT
methyltransferase
L2_026_000M1_scaffold_385_17
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14956..16566)
DNA (1611bp) protein (537aa)
Metallo-beta-lactamase domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP2_9DELT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEB33633.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
beta-lactamase domain-containing protein
L2_026_000M1_scaffold_385_18
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16738..17403
DNA (666bp) protein (222aa)
TIGR00730 family protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP3_9DELT
TIGR00730 family protein {ECO:0000313|EMBL:EEB33634.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_19
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17478..17912
DNA (435bp) protein (145aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP4_9DELT
CMP/dCMP deaminase
L2_026_000M1_scaffold_385_20
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17953..19446
DNA (1494bp) protein (498aa)
Spermine/spermidine synthase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP5_9DELT
Spermine/spermidine synthase {ECO:0000313|EMBL:EEB33636.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
spermine synthase
L2_026_000M1_scaffold_385_21
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19695..20084
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33637.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_22
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20632..22002
DNA (1371bp) protein (457aa)
Ethanolamine ammonia-lyase, large subunit {ECO:0000313|EMBL:EEB33639.1}; EC=4.3.1.7 {ECO:0000313|EMBL:EEB33639.1};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Ethanolamine ammonia-lyase, large subunit n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP8_9DELT
ethanolamine ammonia lyase large subunit
L2_026_000M1_scaffold_385_23
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21992..22816
DNA (825bp) protein (275aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|SAAS:SAAS00064958};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ethanolamine ammonia-lyase (EC:4.3.1.7)
Ethanolamine ammonia-lyase, light subunit n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTP9_9DELT
L2_026_000M1_scaffold_385_24
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23158..24321)
DNA (1164bp) protein (388aa)
SufB/sufD domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ0_9DELT
SufB/sufD domain protein {ECO:0000313|EMBL:EEB33641.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
SufBD protein
L2_026_000M1_scaffold_385_25
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24318..25112)
DNA (795bp) protein (265aa)
Putative FeS assembly ATPase SufC n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ1_9DELT
Putative FeS assembly ATPase SufC {ECO:0000313|EMBL:EEB33642.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ABC transporter-like protein
L2_026_000M1_scaffold_385_26
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25168..25491)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33643.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_27
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25722..26393)
DNA (672bp) protein (224aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Adenylate kinase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ3_9DELT
adenylate kinase
L2_026_000M1_scaffold_385_28
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26564..29998)
DNA (3435bp) protein (1145aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33645.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_29
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30131..30457)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB33646.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L2_026_000M1_scaffold_385_30
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30571..31968
DNA (1398bp) protein (466aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTQ6_9DELT
Radical SAM domain protein {ECO:0000313|EMBL:EEB33647.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
radical SAM protein
Displaying items 1-30 of 41 in total

View Taxonomy