ggKbase home page

L2_026_000M1_scaffold_2233

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_2233_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1..222
DNA (222bp) protein (74aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4P4_9ACTN
L2_026_000M1_scaffold_2233_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

219..1619
DNA (1401bp) protein (467aa)
NusB family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6J4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73372.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusB/RsmB/TIM44
L2_026_000M1_scaffold_2233_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1781..2017)
DNA (237bp) protein (79aa)
Putative regulatory protein (CxxC_CxxC_SSSS) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6J2_9ACTN
Putative regulatory protein (CxxC_CxxC_SSSS) {ECO:0000313|EMBL:EBA40351.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
FmdB family regulatory protein
L2_026_000M1_scaffold_2233_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2106..5402)
DNA (3297bp) protein (1099aa)
4-alpha-glucanotransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHQ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73374.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
4-alpha-glucanotransferase
L2_026_000M1_scaffold_2233_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5621..7903)
DNA (2283bp) protein (761aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8S3_9ACTN
L2_026_000M1_scaffold_2233_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7994..9121)
DNA (1128bp) protein (376aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EBA40347.1}; EC=2.7.7.27 {ECO:0000313|EMBL:EBA40347.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glucose-1-phosphate adenylyltransferase subunit GlgD (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I8_9ACTN
L2_026_000M1_scaffold_2233_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9126..10274)
DNA (1149bp) protein (383aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nucleotidyl transferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Collinsella RepID=A4E6I7_9ACTN
L2_026_000M1_scaffold_2233_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10383..11441)
DNA (1059bp) protein (353aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I6_9ACTN
Displaying 8 items

View Taxonomy