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L2_026_000M1_scaffold_1160

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1160_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(176..1576)
DNA (1401bp) protein (467aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF72_9ACTN
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:CDA35234.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
L2_026_000M1_scaffold_1160_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1735..2628)
DNA (894bp) protein (298aa)
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBI1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72575.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
homocysteine S-methyltransferase
L2_026_000M1_scaffold_1160_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2639..3082)
DNA (444bp) protein (148aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBI0_9ACTN
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EBA39184.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DtxR family iron (metal) dependent repressor
L2_026_000M1_scaffold_1160_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3119..4429
DNA (1311bp) protein (437aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBH9_9ACTN
L2_026_000M1_scaffold_1160_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4683..5918)
DNA (1236bp) protein (412aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Collinsella RepID=A4EBH8_9ACTN
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:CDA35238.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell envelope-related transcriptional attenuator
L2_026_000M1_scaffold_1160_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5931..7169)
DNA (1239bp) protein (413aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF76_9ACTN
L2_026_000M1_scaffold_1160_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7303..7695)
DNA (393bp) protein (131aa)
ATP synthase epsilon chain n=2 Tax=Collinsella RepID=A4EBH5_9ACTN
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase F1 subcomplex subunit epsilon
L2_026_000M1_scaffold_1160_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7699..9153)
DNA (1455bp) protein (485aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase subunit beta n=2 Tax=Collinsella RepID=A4EBH4_9ACTN
ATP synthase F1 subcomplex subunit beta
L2_026_000M1_scaffold_1160_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(9153..10061)
DNA (909bp) protein (303aa)
ATP synthase gamma chain n=2 Tax=Collinsella RepID=A4EBH2_9ACTN
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase F1 subcomplex subunit gamma
L2_026_000M1_scaffold_1160_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10067..11665)
DNA (1599bp) protein (533aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase subunit alpha n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z699_9ACTN
ATP synthase F1 subcomplex subunit alpha
L2_026_000M1_scaffold_1160_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11665..12141)
DNA (477bp) protein (159aa)
ATP synthase subunit delta n=2 Tax=Collinsella RepID=A4EBG9_9ACTN
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase F1 subcomplex subunit delta
L2_026_000M1_scaffold_1160_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12131..12733)
DNA (603bp) protein (201aa)
ATP synthase subunit b n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBG8_9ACTN
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATP synthase F0 subunit B
L2_026_000M1_scaffold_1160_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12749..12943)
DNA (195bp) protein (65aa)
ATP synthase subunit C n=2 Tax=Collinsella RepID=R5ZLV0_9ACTN
ATP synthase subunit C {ECO:0000313|EMBL:CDA35246.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase F0 subcomplex subunit C
L2_026_000M1_scaffold_1160_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13068..13871)
DNA (804bp) protein (268aa)
ATP synthase subunit a n=2 Tax=Collinsella RepID=R6A242_9ACTN
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP synthase F0 subcomplex subunit A
L2_026_000M1_scaffold_1160_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13875..14186)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6A5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72602.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_026_000M1_scaffold_1160_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14467..15114)
DNA (648bp) protein (216aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBG2_9ACTN
L2_026_000M1_scaffold_1160_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15238..16779)
DNA (1542bp) protein (514aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBG1_9ACTN
L2_026_000M1_scaffold_1160_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16793..17536)
DNA (744bp) protein (248aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLV5_9ACTN
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:CDA35251.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
SUA5/yciO/yrdC domain-containing protein
L2_026_000M1_scaffold_1160_19
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(17671..18117)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WFG7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71915.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
L2_026_000M1_scaffold_1160_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18383..19633)
DNA (1251bp) protein (417aa)
Methyltransferase HemK family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF87_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72596.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
protein-(glutamine-N5) methyltransferase
L2_026_000M1_scaffold_1160_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20129..21226)
DNA (1098bp) protein (366aa)
Peptide chain release factor 1 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF6_9ACTN
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptide chain release factor 1
L2_026_000M1_scaffold_1160_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21455..22870)
DNA (1416bp) protein (472aa)
Peptidase dimerization domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF3_9ACTN
Peptidase dimerization domain protein {ECO:0000313|EMBL:EBA39157.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase M20
L2_026_000M1_scaffold_1160_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22943..23728)
DNA (786bp) protein (262aa)
Putative molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF2_9ACTN
Putative molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EBA39156.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter ATP-binding protein
L2_026_000M1_scaffold_1160_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23751..24899)
DNA (1149bp) protein (383aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72592.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polar amino acid ABC transporter inner membrane subunit
L2_026_000M1_scaffold_1160_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24909..25835)
DNA (927bp) protein (309aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72591.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter substrate-binding protein
L2_026_000M1_scaffold_1160_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26099..26992)
DNA (894bp) protein (298aa)
Aldose 1-epimerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72590.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aldose-1-epimerase
L2_026_000M1_scaffold_1160_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27072..27941)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFL8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35354.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_026_000M1_scaffold_1160_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28115..29443
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z935_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72588.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
major facilitator superfamily protein
L2_026_000M1_scaffold_1160_29
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(29623..29973)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UY73_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK43523.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L2_026_000M1_scaffold_1160_30
unknown

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30135..30599
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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