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L2_026_000M1_scaffold_1358

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1358_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..3507)
DNA (3507bp) protein (1169aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH9_9ACTN
UvrD/REP helicase
L2_026_000M1_scaffold_1358_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3511..6609)
DNA (3099bp) protein (1033aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74870.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_026_000M1_scaffold_1358_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6830..7129)
DNA (300bp) protein (100aa)
TrpR family protein YerC/YecD n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8B4_9ACTN
TrpR protein YerC/YecD {ECO:0000313|EMBL:KGI74871.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
TrpR-like protein YerC/YecD
L2_026_000M1_scaffold_1358_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7454..7819
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74872.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_026_000M1_scaffold_1358_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7961..8389)
DNA (429bp) protein (143aa)
Transcriptional regulator Rrf2 family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAS0_9ACTN
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDA35935.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, BadM/Rrf2 family
L2_026_000M1_scaffold_1358_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8643..9581
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH3_9ACTN
L2_026_000M1_scaffold_1358_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9762..10862
DNA (1101bp) protein (367aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH2_9ACTN
L2_026_000M1_scaffold_1358_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10999..12042)
DNA (1044bp) protein (348aa)
M42 glutamyl aminopeptidase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAG9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74876.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Cellulase M and related proteins
L2_026_000M1_scaffold_1358_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12647..13813)
DNA (1167bp) protein (389aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH86_9ACTN
Lactaldehyde reductase {ECO:0000313|EMBL:CDA35939.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_026_000M1_scaffold_1358_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13979..14695)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAS5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35940.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
membrane protein
L2_026_000M1_scaffold_1358_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14778..17084
DNA (2307bp) protein (769aa)
UPF0313 protein COLAER_01422 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAG4_9ACTN
UPF0313 protein COLAER_01422 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Fe-S oxidoreductase
L2_026_000M1_scaffold_1358_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17081..17992)
DNA (912bp) protein (304aa)
CAAX amino terminal protease family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAG3_9ACTN
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EBA39486.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
CAAX amino terminal protease family protein
Displaying 12 items

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