ggKbase home page

L2_026_000M1_scaffold_1517

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1517_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

226..768
DNA (543bp) protein (181aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=2 Tax=Collinsella RepID=A4ECF9_9ACTN
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EBA38690.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L2_026_000M1_scaffold_1517_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

780..2084
DNA (1305bp) protein (435aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN95_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73075.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_026_000M1_scaffold_1517_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2200..3243
DNA (1044bp) protein (348aa)
Cell shape determining protein MreB/Mrl family n=2 Tax=Collinsella RepID=R5ZAG6_9ACTN
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CDA35835.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rod shape-determining protein MreB
L2_026_000M1_scaffold_1517_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3322..4263
DNA (942bp) protein (314aa)
Cell shape-determining protein MreC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG2_9ACTN
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rod shape-determining protein MreC
L2_026_000M1_scaffold_1517_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4275..4841
DNA (567bp) protein (189aa)
Putative rod shape-determining protein MreD n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z820_9ACTN
Putative rod shape-determining protein MreD {ECO:0000313|EMBL:CDA35833.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rod shape-determining protein MreD
L2_026_000M1_scaffold_1517_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4855..6924
DNA (2070bp) protein (690aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG5_9ACTN
Penicillin-binding protein 2 {ECO:0000313|EMBL:EBA38696.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_026_000M1_scaffold_1517_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6934..8160
DNA (1227bp) protein (409aa)
Cell cycle protein FtsW/RodA/SpoVE family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN90_9ACTN
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CDA35831.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell elongation-specific peptidoglycan biosynthesis regulator RodA
L2_026_000M1_scaffold_1517_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8179..9108
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38698.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_026_000M1_scaffold_1517_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9119..10996
DNA (1878bp) protein (626aa)
Radical SAM domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGW5_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:CDA35829.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Radical SAM domain protein
L2_026_000M1_scaffold_1517_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10993..11805
DNA (813bp) protein (271aa)
Radical SAM-linked protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG9_9ACTN
Radical SAM-linked protein {ECO:0000313|EMBL:EBA38700.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_026_000M1_scaffold_1517_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


11873..12247
DNA (375bp) protein (125aa)
50S ribosomal protein L21 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECH0_9ACTN
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L21P
L2_026_000M1_scaffold_1517_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


12281..12538
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=2 Tax=Collinsella RepID=A4ECH1_9ACTN
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LSU ribosomal protein L27P
L2_026_000M1_scaffold_1517_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12624..14090
DNA (1467bp) protein (489aa)
GTPase Obg n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAF7_9ACTN
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GTP-binding protein Obg/CgtA
L2_026_000M1_scaffold_1517_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14094..14771
DNA (678bp) protein (226aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGW0_9ACTN
L2_026_000M1_scaffold_1517_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14784..15392
DNA (609bp) protein (203aa)
Hydrolase HD family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z808_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73062.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
metal dependent phosphohydrolase
L2_026_000M1_scaffold_1517_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15420..15875
DNA (456bp) protein (152aa)
Ribosomal silencing factor RsfS n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3V4_9ACTN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
iojap family protein
L2_026_000M1_scaffold_1517_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16013..16285
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECH8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38709.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transposase
Displaying 17 items

View Taxonomy