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L2_026_000M1_scaffold_395

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_395_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2..172)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7V0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40809.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_026_000M1_scaffold_395_2
unknown

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262..417
DNA (156bp) protein (52aa)

This feature has no annotations

L2_026_000M1_scaffold_395_3
unknown

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450..605
DNA (156bp) protein (52aa)

This feature has no annotations

L2_026_000M1_scaffold_395_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(678..1424)
DNA (747bp) protein (249aa)
Anti-sigma factor antagonist n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2M1_9ACTN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
sulfate transporter/antisigma-factor antagonist STAS
L2_026_000M1_scaffold_395_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1506..3851)
DNA (2346bp) protein (782aa)
Stage II sporulation protein E n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7V3_9ACTN
Stage II sporulation protein E {ECO:0000313|EMBL:EBA40812.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
protein serine phosphatase with GAF(s) sensor(s)
L2_026_000M1_scaffold_395_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4592..5620)
DNA (1029bp) protein (343aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNM3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35971.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptide ABC transporter ATPase
L2_026_000M1_scaffold_395_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5620..6711)
DNA (1092bp) protein (364aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAX0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72518.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptide ABC transporter ATPase
L2_026_000M1_scaffold_395_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6714..7649)
DNA (936bp) protein (312aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72519.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_026_000M1_scaffold_395_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7664..8701)
DNA (1038bp) protein (346aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECM8_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA38638.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
binding-protein-dependent transport system inner membrane protein
L2_026_000M1_scaffold_395_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8858..10534)
DNA (1677bp) protein (559aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECM9_9ACTN
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EBA38639.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
family 5 extracellular solute-binding protein
L2_026_000M1_scaffold_395_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10826..11080)
DNA (255bp) protein (85aa)
Preprotein translocase, SecG subunit n=2 Tax=Collinsella RepID=A4ECN0_9ACTN
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDA35966.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
preprotein translocase subunit SecG
L2_026_000M1_scaffold_395_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11245..12798)
DNA (1554bp) protein (518aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN2_9ACTN
L2_026_000M1_scaffold_395_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12804..13571)
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHC0_9ACTN
L2_026_000M1_scaffold_395_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13564..14754)
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8E5_9ACTN
L2_026_000M1_scaffold_395_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14895..15920)
DNA (1026bp) protein (342aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4A8_9ACTN
L2_026_000M1_scaffold_395_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16114..17043)
DNA (930bp) protein (310aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNL1_9ACTN
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_026_000M1_scaffold_395_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17050..17970)
DNA (921bp) protein (307aa)
UPF0042 nucleotide-binding protein BN511_01214 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAV9_9ACTN
Nucleotide-binding protein HMPREF9463_01954 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_026_000M1_scaffold_395_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18072..18758)
DNA (687bp) protein (229aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHB2_9ACTN
L2_026_000M1_scaffold_395_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18829..19794)
DNA (966bp) protein (322aa)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8D9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72530.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator/sugar kinase
L2_026_000M1_scaffold_395_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19965..20885)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4A3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72531.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
dihydrodipicolinate synthetase
L2_026_000M1_scaffold_395_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20954..21805)
DNA (852bp) protein (284aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNK5_9ACTN
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:CDA35956.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Acetyl xylan esterase
L2_026_000M1_scaffold_395_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21798..22724)
DNA (927bp) protein (309aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECP2_9ACTN
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:EBA38652.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Acetyl xylan esterase
L2_026_000M1_scaffold_395_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22856..23683)
DNA (828bp) protein (276aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4ECP3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35954.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter-like protein
L2_026_000M1_scaffold_395_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23684..25699)
DNA (2016bp) protein (672aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8D5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72535.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L2_026_000M1_scaffold_395_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25703..26659)
DNA (957bp) protein (319aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A496_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72536.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_026_000M1_scaffold_395_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26817..28430)
DNA (1614bp) protein (538aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECP6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72537.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 5 extracellular solute-binding protein
L2_026_000M1_scaffold_395_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28796..30736)
DNA (1941bp) protein (647aa)
UvrABC system protein C n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAT7_9ACTN
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
excinuclease ABC subunit C
L2_026_000M1_scaffold_395_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30743..32425)
DNA (1683bp) protein (561aa)
Integral membrane protein MviN n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH99_9ACTN
Integral membrane protein MviN {ECO:0000313|EMBL:CDA35949.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
virulence factor MVIN family protein
L2_026_000M1_scaffold_395_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32429..32929)
DNA (501bp) protein (167aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Collinsella RepID=A4ECP9_9ACTN
ybaK/ebsC protein
L2_026_000M1_scaffold_395_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33062..35941)
DNA (2880bp) protein (960aa)
UvrABC system protein A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ0_9ACTN
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
excinuclease ABC subunit A
Displaying items 1-30 of 37 in total

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