ggKbase home page

L2_026_000M1_scaffold_445_16

Organism: dasL2_026_000M1_metabat_metabat_70_fa_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(16131..18686)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 851.0
  • Bit_score: 1587
  • Evalue 0.0
Transcription termination factor Rho n=2 Tax=Collinsella RepID=R5ZND9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 851.0
  • Bit_score: 1587
  • Evalue 0.0
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 788.0
  • Bit_score: 744
  • Evalue 2.90e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella sp. CAG:166 → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2556
GTGTCTGATCAACAGCAAGAAAACGAAATAACGACGACGCAAGCCGCTCCCGCTGCACCGGTTGCGTCGGACCAGGTCGCGGCGCCCGCGCAAACCTCGGCTCCTGAGACGCCTAAGGCTGCAACGGCTGAGAAGGCCGTGCCTGCAACTGGTGAGGAGGCTGCTCCGGCAAAGCCCAAGCGCACGCGCCGCGCGGCCAAGCCTGCCGCTGACGGCGAGGAGGTCACCAATCCCAAGCGCCGTACCGCGCGCACGACGCGCGCCAAGCGCACCGTTGCAGCTGACTCCTCGGCGCCGATTTCCGATGAGGTCGCGCAGGCACGTGCGTTGGCGCAGATTAGCGAGGCTCAGGTGGTGCGCGCCCGCCGTCGTGCTGCCGAGCGCGAGGCCGCGGCTCTGACCGAGCTTGCAGCTCCGTCTGTGCCCGAGACGCCTGCCGCCACCGAGACCCCTGTCGCCGACCAGCCAACCGAGAAGCCGGTACCGCGCACACGCCGTCGCACGGCTGCTAAGGCCGAGCAGGTTGCCGATCAGGTAACCCCCGAGCTCGCTGAGGCTTCGGTCCGTTCCGCGGCAGGGGAGGGCACATCGCCTGTTGAGCCCGCTGCGCCTGCCGAGGCCAGCGAAGTTCCCGTTGTCGATCCGGCTTTGCGCCCGCACCGTCGCGGTCGCAAGCCCAAGGCTTTCGTCGAGGCCGAGAAGGCCGCAGCCGCAGCCGCCGCCGCTCGGGATGCTGCGGCGACCGCCGAGCCTGCAACCGCTGCCGACGCGCCCGTCCAGGATGCTACGACTTCCGAGGCCGTTTCTGCTGATGTCGAGCCCGCCGACGTCCGCCCTGGTCGCAGCCATCGTACTGCTGCTAAGCGCACGTCCAAGGCCAAGGCTGCCAAGAAGGGTGCGTCCGAGGATTCCGCCGAGACGACCGCCGATGCATCGATTGATGCCGCCGAGCCCCAGGACGTCGAACAGCCTGTGTCCGAAAAGCCCAAGCGTGGTCGTAAGAAGTCCGCTAAGGCCAAGGCGTCCGAGCAGCGGGCTGATGTCGAAGCGCAGGTCGATTCCGGCGCCGAGGCCAATGACGCCGCTGCGGCCAATGCCGACGCCGCCGCAACCGATGGCGCCGCGCCCGCCGAGGCCGAAGACGGCGCTCGCCCCAACCGTCGCCAGCACAAGCGCAACGAGGAGCGCAACGAGCGCAAGGACGAGCGCAACAACGACCGTCGCAACCGCCAGCGCGATCGCAAACAGCGCAACAAGGAGCGCAACGCCGCCCCCACCGAGCCCACGCTTTCGCGCGAGGAGCTCGCTGCCATGAAGGTCGCCGAACTGCGCGAGAAGGCCAAGGGGTTCGAGATCGAGACGACCGGCAAGAAGAAAGCCGAGCTCGTCGAGGAGATCTACGTCACCGCCGCGAAGGCCGAGGGCTTCCGCGACATCAAGGGCATTCTGCAGATTCGCCCGGACAGCTCCGGCATCATCCACGCCCATGGCTACATGAAGTCCAACGACGACGCCTTCGTGCCCGCCTACCTCATCCGCTCCGCGCGCCTGCGCACGGGCGACGTCATCGAGGGCTCGCTGCGCCCTTCGCGCGGCGGCGACAAGCGCGCCGGCCTCGCCAAAATCACGACCGTCAACGGTCTGGATCCCGAGCAGATTCGCAATCGCCCCAAGTTTGGTGACCTCACCCCGGTCTATCCCAACGAGCCGCTGCGCATGGAGCACGGCAAAGACTCCATTACCGGTCGCGCCATCGACATCGTGTCGCCGATCGGCAAGGGTCAGCGTGGCCTGATCGTGTCCCCGCCCAAGGCCGGCAAGACCACGATCCTCAAGAAGATCTGCCAGTCTATCTCGATCAATAATCCCGAGGTACACCTCATCTGCCTGCTCGTCGACGAGCGCCCCGAAGAGGTCACCGACATGCAGCGCTCCATTAAGGGCGAGGTCGTGGCCTCCACCTTCGATATGCCCGCGGACAACCACACTCGCGTGGCCGAGCTCGTCATCGAGCGCGCCAAGCGCATCGTGGAACTGGGCGGCGATGTTGTAGTTGTGCTCGACTCCATCACGCGTCTTGCCCGCGCCTACAACTTGGCGGCGCCCGCCTCGGGCCGCATCCTTTCGGGCGGCGTCGATTCGGCGGCCCTGTATCCGCCCAAGCGCTTCCTGGGCGCAGCCCGTAATATCGAGAACGGTGGCTCGCTCACCATCCTCGCCTCCGCACTCATCGATACCGGCTCCAAGATGGACGAGGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGCTTAAGCTCGACCGCGACCTGGCCGATCGCCGCATTTTCCCGGCCATCGACCCCGTTGCCTCGGGTACGCGCAACGAGGACCTGCTGGTCGACGAGCAGATGCGCCCGTTTGTCTTTGGTCTGCGTCGCATTCTTGCTGGCATGAATAACACCGAGCGCGCAGCCGCGTCGTTCATCAAGGGTCTTAAGGGCACCAACACCAACCAGGAGTTCCTGGTGCGTTCGGCCAAAAAGCACAGCGACTACGAGCAGACGTTCTAG
PROTEIN sequence
Length: 852
VSDQQQENEITTTQAAPAAPVASDQVAAPAQTSAPETPKAATAEKAVPATGEEAAPAKPKRTRRAAKPAADGEEVTNPKRRTARTTRAKRTVAADSSAPISDEVAQARALAQISEAQVVRARRRAAEREAAALTELAAPSVPETPAATETPVADQPTEKPVPRTRRRTAAKAEQVADQVTPELAEASVRSAAGEGTSPVEPAAPAEASEVPVVDPALRPHRRGRKPKAFVEAEKAAAAAAAARDAAATAEPATAADAPVQDATTSEAVSADVEPADVRPGRSHRTAAKRTSKAKAAKKGASEDSAETTADASIDAAEPQDVEQPVSEKPKRGRKKSAKAKASEQRADVEAQVDSGAEANDAAAANADAAATDGAAPAEAEDGARPNRRQHKRNEERNERKDERNNDRRNRQRDRKQRNKERNAAPTEPTLSREELAAMKVAELREKAKGFEIETTGKKKAELVEEIYVTAAKAEGFRDIKGILQIRPDSSGIIHAHGYMKSNDDAFVPAYLIRSARLRTGDVIEGSLRPSRGGDKRAGLAKITTVNGLDPEQIRNRPKFGDLTPVYPNEPLRMEHGKDSITGRAIDIVSPIGKGQRGLIVSPPKAGKTTILKKICQSISINNPEVHLICLLVDERPEEVTDMQRSIKGEVVASTFDMPADNHTRVAELVIERAKRIVELGGDVVVVLDSITRLARAYNLAAPASGRILSGGVDSAALYPPKRFLGAARNIENGGSLTILASALIDTGSKMDEVIFEEFKGTGNMELKLDRDLADRRIFPAIDPVASGTRNEDLLVDEQMRPFVFGLRRILAGMNNTERAAASFIKGLKGTNTNQEFLVRSAKKHSDYEQTF*