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L2_026_000M1_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_445_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3..710
DNA (708bp) protein (236aa)
SufB/sufD domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A434_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72827.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
SufBD protein
L2_026_000M1_scaffold_445_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

707..2032
DNA (1326bp) protein (442aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase SufS subfamily n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNE9_9ACTN
L2_026_000M1_scaffold_445_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2025..2459
DNA (435bp) protein (145aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB20_9ACTN
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EBA39337.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
NifU family SUF system FeS assembly protein
L2_026_000M1_scaffold_445_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3121..3933)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39335.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transposase
L2_026_000M1_scaffold_445_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4337..5071
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB17_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39334.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
NifU-like domain-containing protein
L2_026_000M1_scaffold_445_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5090..6094
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB16_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39333.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_026_000M1_scaffold_445_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6344..7870
DNA (1527bp) protein (509aa)
FAD binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNE4_9ACTN
FAD binding domain protein {ECO:0000313|EMBL:CDA35891.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L2_026_000M1_scaffold_445_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8087..9094
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAV2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39269.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_026_000M1_scaffold_445_9
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9326..10228
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CCT1_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN76954.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L2_026_000M1_scaffold_445_10
unknown

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10310..10489
DNA (180bp) protein (60aa)

This feature has no annotations

L2_026_000M1_scaffold_445_11
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10528..10974
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YVA6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83419.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
hypothetical protein
L2_026_000M1_scaffold_445_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11630..12811
DNA (1182bp) protein (394aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75288.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_026_000M1_scaffold_445_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12953..13846
DNA (894bp) protein (298aa)
fructokinase (EC:2.7.1.4)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH19_9ACTN
ROK family protein {ECO:0000313|EMBL:CDA35889.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_026_000M1_scaffold_445_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13960..14409)
DNA (450bp) protein (150aa)
VanZ-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z867_9ACTN
VanZ-like protein {ECO:0000313|EMBL:CDA35888.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
VanZ family protein
L2_026_000M1_scaffold_445_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14417..15817)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A421_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35887.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_026_000M1_scaffold_445_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16131..18686)
DNA (2556bp) protein (852aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Transcription termination factor Rho n=2 Tax=Collinsella RepID=R5ZND9_9ACTN
transcription termination factor Rho
L2_026_000M1_scaffold_445_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(19217..21070)
DNA (1854bp) protein (618aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=2 Tax=Collinsella RepID=A4EAU4_9ACTN
L2_026_000M1_scaffold_445_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21413..21898
DNA (486bp) protein (162aa)
CarD-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z865_9ACTN
CarD-like protein {ECO:0000313|EMBL:CDA35883.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_026_000M1_scaffold_445_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22007..22606
DNA (600bp) protein (200aa)
HDIG domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU2_9ACTN
HDIG domain protein {ECO:0000313|EMBL:EBA39259.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
HDIG domain-containing protein
L2_026_000M1_scaffold_445_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22677..23963)
DNA (1287bp) protein (429aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU1_9ACTN
L2_026_000M1_scaffold_445_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23995..25494
DNA (1500bp) protein (500aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75210.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
pap; Proline iminopeptidase
L2_026_000M1_scaffold_445_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25797..26903)
DNA (1107bp) protein (369aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Glutamate 5-kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT8_9ACTN
glutamate 5-kinase
L2_026_000M1_scaffold_445_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27006..28511)
DNA (1506bp) protein (502aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT7_9ACTN
nicotinate phosphoribosyltransferase
L2_026_000M1_scaffold_445_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28596..29054)
DNA (459bp) protein (153aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT6_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA39253.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
infB; translation initiation factor IF-2
L2_026_000M1_scaffold_445_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29342..30280)
DNA (939bp) protein (313aa)
Radical SAM domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAK6_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:CDA35875.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Radical SAM domain protein
L2_026_000M1_scaffold_445_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30806..32005
DNA (1200bp) protein (400aa)
Glycosyltransferase, group 4 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75188.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycosyl transferase family protein
L2_026_000M1_scaffold_445_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32166..33215
DNA (1050bp) protein (350aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT3_9ACTN
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KGI75189.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_026_000M1_scaffold_445_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33600..33920)
DNA (321bp) protein (107aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75190.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methylated-DNA--protein-cysteine methyltransferase
L2_026_000M1_scaffold_445_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34000..34854)
DNA (855bp) protein (285aa)
EDD domain protein, DegV family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75172.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
degV family protein
L2_026_000M1_scaffold_445_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34974..35423)
DNA (450bp) protein (150aa)
Transcriptional regulator MarR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI47_9ACTN
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA36274.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, MarR family
Displaying items 1-30 of 34 in total

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