ggKbase home page

L2_026_064G1_scaffold_189

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_064G1_scaffold_189_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57..542)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I9D3_9BACE
UpxZ of transcription anti-terminator antagonists family protein {ECO:0000313|EMBL:EXY88886.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
updZ; putative transcriptional regulator
L2_026_064G1_scaffold_189_2
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(601..1179)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=K1G288_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD40789.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative transcriptional regulator Updx homolog
L2_026_064G1_scaffold_189_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2228..2575
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1GKB9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY82827.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L2_026_064G1_scaffold_189_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2714..3547
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FPY2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY88851.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L2_026_064G1_scaffold_189_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3874..4446)
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I family protein {ECO:0000313|EMBL:EYA17574.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EYA17574.1};; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
DNA-3-methyladenine glycosylase I n=5 Tax=Bacteroides RepID=C6I9D9_9BACE
tag; putative DNA-3-methyladenine glycosylase I
L2_026_064G1_scaffold_189_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4848..5699)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8X5S9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY42903.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
antirepressor
L2_026_064G1_scaffold_189_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6297..8015
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EXZ51368.1}; EC=3.1.-.- {ECO:0000313|EMBL:EXZ51368.1};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Single-stranded-DNA-specific exonuclease RecJ n=4 Tax=Bacteroides RepID=D1JV74_9BACE
putative single-stranded-DNA-specific exonuclease
L2_026_064G1_scaffold_189_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8012..9916
DNA (1905bp) protein (635aa)
ATP-dependent DNA helicase, RecQ family protein {ECO:0000313|EMBL:EXY88873.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EXY88873.1};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
RecQ family ATP-dependent DNA helicase n=10 Tax=Bacteroides RepID=C6I9E1_9BACE
putative DEAD box helicase
L2_026_064G1_scaffold_189_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9979..10941
DNA (963bp) protein (321aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q5L945_BACFN
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EXY88866.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_026_064G1_scaffold_189_10
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11009..12244)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C6I9E3_9BACE
putative major facilitator family transporter
Putative major facilitator family transporter {ECO:0000313|EMBL:CDD38640.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_026_064G1_scaffold_189_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12250..13908)
DNA (1659bp) protein (553aa)
Sialidase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA3_BACFR
BNR repeat-like domain protein {ECO:0000313|EMBL:EXY82838.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
sialidase
L2_026_064G1_scaffold_189_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13932..15032)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=6 Tax=Bacteroides fragilis RepID=I3HND7_BACFG
BNR repeat-like domain protein {ECO:0000313|EMBL:EXZ03958.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L2_026_064G1_scaffold_189_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15125..16585)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I9E6_9BACE
putative outer membrane protein probably involved in nutrient binding
Uncharacterized protein {ECO:0000313|EMBL:EIY92746.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_026_064G1_scaffold_189_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16599..19895)
DNA (3297bp) protein (1099aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides fragilis RepID=I3HND9_BACFG
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXY82841.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L2_026_064G1_scaffold_189_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19985..20893)
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6YXL2_9BACE
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EXZ03939.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
putative N-acetylneuraminate lyase (sialic acid lyase)
L2_026_064G1_scaffold_189_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21099..21821)
DNA (723bp) protein (241aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9E9_9BACE
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EYB08227.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_026_064G1_scaffold_189_17
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22250..23134
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9AV61_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD38647.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative prefrenate dehydratase
L2_026_064G1_scaffold_189_18
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23109..24293
DNA (1185bp) protein (395aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=I3HNE3_BACFG
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:CDD38648.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_026_064G1_scaffold_189_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24316..25377
DNA (1062bp) protein (354aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=13 Tax=Bacteroides RepID=I3HNE4_BACFG
putative chorismate mutase
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EKA83868.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_026_064G1_scaffold_189_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25393..26166
DNA (774bp) protein (258aa)
Prephenate dehydratase n=14 Tax=Bacteroides RepID=Q64P94_BACFR
putative prephenate dehydrogenase family protein
Prephenate dehydrogenase family protein {ECO:0000313|EMBL:EYE42105.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_026_064G1_scaffold_189_21
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26889..28916
DNA (2028bp) protein (676aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
DNA primase n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I9F5_9BACE
putative DNA primase
L2_026_064G1_scaffold_189_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28950..30542)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9F6_9BACE
putative secreted sulfatase ydeN precursor
Putative secreted sulfatase ydeN {ECO:0000313|EMBL:BAD50690.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_026_064G1_scaffold_189_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30569..32050)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9AUG0_BACFG
putative exported uslfatase
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:EYA17593.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_026_064G1_scaffold_189_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32135..33742)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WMY9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY92758.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_026_064G1_scaffold_189_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33756..37133)
DNA (3378bp) protein (1126aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides fragilis RepID=I3HNF1_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY92759.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative outer membrane protein probably involved in nutrient binding
Displaying 25 items

View Taxonomy