ggKbase home page

L2_026_064G1_scaffold_244

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_064G1_scaffold_244_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57..542)
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=Q64VA2_BACFR
upbZ; putative LPS biosynthesis related transcriptional regulatory protein
UpxZ of transcription anti-terminator antagonists family protein {ECO:0000313|EMBL:EXY85002.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L2_026_064G1_scaffold_244_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(546..1070)
DNA (525bp) protein (175aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=C6IBY4_9BACE
upbY; putative LPS biosynthesis related transcriptional regulatory protein
Uncharacterized protein {ECO:0000313|EMBL:EKA83987.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_026_064G1_scaffold_244_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1592..1930
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HUG6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY85000.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L2_026_064G1_scaffold_244_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2071..2418
DNA (348bp) protein (116aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WUX5_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ05869.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L2_026_064G1_scaffold_244_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2468..3271
DNA (804bp) protein (268aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q5LE64_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY91029.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_026_064G1_scaffold_244_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3565..4836)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=E1WUX3_BACF6
AAA domain protein {ECO:0000313|EMBL:EYA39344.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
hypothetical protein
L2_026_064G1_scaffold_244_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5050..6123
DNA (1074bp) protein (358aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
GDP-mannose 4,6-dehydratase n=18 Tax=Bacteroides RepID=E1WUX2_BACF6
putative GDP mannose 4,6-dehydratase
L2_026_064G1_scaffold_244_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6128..7198
DNA (1071bp) protein (357aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
GDP-L-fucose synthase n=2 Tax=Bacteroides fragilis RepID=I3HUH1_BACFG
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
L2_026_064G1_scaffold_244_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7384..9042
DNA (1659bp) protein (553aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WUX0_BACF6
putative long-chain-fatty-acid-CoA ligase
AMP-binding enzyme family protein {ECO:0000313|EMBL:EXY91065.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_026_064G1_scaffold_244_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9151..10308
DNA (1158bp) protein (386aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64VB1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ45022.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L2_026_064G1_scaffold_244_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10400..12394)
DNA (1995bp) protein (665aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Fructose-1,6-bisphosphatase class 3 n=13 Tax=Bacteroides RepID=F16PC_BACFN
hypothetical protein
L2_026_064G1_scaffold_244_12
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12443..14104)
DNA (1662bp) protein (554aa)
Uncharacterized transporter BF1818 n=13 Tax=Bacteroides RepID=Y1818_BACFR
putative antiporter
Putative antiporter {ECO:0000313|EMBL:CDD38758.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_026_064G1_scaffold_244_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14190..15542)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=12 Tax=Bacteroides RepID=C6IBX3_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EYA19670.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
putative transmembrane transport efflux protein
L2_026_064G1_scaffold_244_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15654..16100)
DNA (447bp) protein (149aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WUW5_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ54029.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_026_064G1_scaffold_244_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16746..18107)
DNA (1362bp) protein (454aa)
Cation efflux pump n=11 Tax=Bacteroides RepID=Q64VB7_BACFR
MATE efflux family protein {ECO:0000313|EMBL:EXY91057.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative transmembrane Na+ driven efflux protein
L2_026_064G1_scaffold_244_16
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18381..18479)
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6Z5A5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD38754.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_026_064G1_scaffold_244_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18680..19261
DNA (582bp) protein (194aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q64VB8_BACFR
putative DNA-binding cyclic-nucleotide binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY97979.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_026_064G1_scaffold_244_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19434..20195)
DNA (762bp) protein (254aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LE76_BACFN
hypothetical protein
Creatinine amidohydrolase family protein {ECO:0000313|EMBL:EXY91068.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_026_064G1_scaffold_244_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20255..22528)
DNA (2274bp) protein (758aa)
Putative TonB-dependent outer membrane protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LE77_BACFN
TonB dependent receptor family protein {ECO:0000313|EMBL:EXY91054.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative TonB-dependent outer membrane protein
L2_026_064G1_scaffold_244_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22750..23088)
DNA (339bp) protein (113aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WUW0_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD48557.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_026_064G1_scaffold_244_21
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23126..23599)
DNA (474bp) protein (158aa)
GAF domain protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JLA8_9BACE
GAF domain protein {ECO:0000313|EMBL:EEZ27145.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative GAF-domain signal transduction protein
L2_026_064G1_scaffold_244_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23606..25345)
DNA (1740bp) protein (580aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=2 Tax=Bacteroides RepID=Q64VC3_BACFR
2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EXY91048.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_026_064G1_scaffold_244_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25462..27375)
DNA (1914bp) protein (638aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Bacteroides RepID=D1JLA6_9BACE
putative two-component histidine sensor kinase
L2_026_064G1_scaffold_244_24
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27493..28650
DNA (1158bp) protein (386aa)
Competence protein ComEA helix-hairpin-helix repeat region n=2 Tax=Bacteroides fragilis RepID=I8X4W0_BACFG
putative RNA-binding protein
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EEZ27142.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Displaying 24 items

View Taxonomy