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L2_026_092G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_092G1_scaffold_110_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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611..1843
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6REL5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53638.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
integrase
L2_026_092G1_scaffold_110_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1908..3104
DNA (1197bp) protein (399aa)
Integrase n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A319_BACTN
integrase
Integrase {ECO:0000313|EMBL:AAO78242.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_026_092G1_scaffold_110_3

Not on your lists

comp(3344..3652)
DNA (309bp) protein (103aa)
DNA binding domain, excisionase family n=2 Tax=root RepID=S0FD78_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKC77637.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_092G1_scaffold_110_4
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3735..4046)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=root RepID=D1K9R3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ19286.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
hypothetical protein
L2_026_092G1_scaffold_110_5
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4444..4926
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=Q8A314_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ37250.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
L2_026_092G1_scaffold_110_6
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5111..5524
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RB58_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53874.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
mobilization protein BmgB
L2_026_092G1_scaffold_110_7
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5521..6471
DNA (951bp) protein (317aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Bacteroides sp. CAG:927 RepID=R5B5V9_9BACE
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:CCX46866.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
mobilization protein BmgA
L2_026_092G1_scaffold_110_8
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6504..7259
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QWI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EGG51894.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
hypothetical protein
L2_026_092G1_scaffold_110_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7461..7556)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1G9D5_BACFG
HTH domain protein {ECO:0000313|EMBL:EFR54994.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
regulatory protein DeoR
L2_026_092G1_scaffold_110_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7553..8179)
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6L6M1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41335.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_026_092G1_scaffold_110_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9044..10237)
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ76_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM19706.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Site-specific recombinase XerD
L2_026_092G1_scaffold_110_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10339..10437
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UV92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16907.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_092G1_scaffold_110_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10687..13875
DNA (3189bp) protein (1063aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9PKE3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16906.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_092G1_scaffold_110_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13892..15451
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZJ74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73946.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_092G1_scaffold_110_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15522..16181)
DNA (660bp) protein (220aa)
MarC family membrane protein n=3 Tax=Bacteroides RepID=I9EAK6_9BACE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
conserved hypothetical protein TIGR00427
L2_026_092G1_scaffold_110_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16244..16936)
DNA (693bp) protein (231aa)
HAD hydrolase, TIGR02254 family n=2 Tax=Bacteroides caccae RepID=A5ZJ72_9BACE
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:EIY16903.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
HAD superfamily (subfamily IA) hydrolase, TIGR02254
L2_026_092G1_scaffold_110_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17035..17892)
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19701.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_026_092G1_scaffold_110_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17927..18601)
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKE0_9BACE
conserved hypothetical protein TIGR00096
L2_026_092G1_scaffold_110_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18612..19217)
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73941.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_092G1_scaffold_110_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19404..21242)
DNA (1839bp) protein (613aa)
Alkaline phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZJ68_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16899.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alkaline phosphatase
L2_026_092G1_scaffold_110_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21255..22775)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19697.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_026_092G1_scaffold_110_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22791..26006)
DNA (3216bp) protein (1072aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ66_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM19696.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-dependent receptor plug
L2_026_092G1_scaffold_110_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26172..26771
DNA (600bp) protein (200aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Thymidine kinase n=2 Tax=Bacteroides caccae RepID=A5ZJ65_9BACE
thymidine kinase
L2_026_092G1_scaffold_110_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26788..27921
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ64_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73936.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
permease
L2_026_092G1_scaffold_110_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28294..29151)
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZIF2_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDM20507.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative transcription regulator
L2_026_092G1_scaffold_110_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29504..30646)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UEQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74159.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative outer membrane protein
L2_026_092G1_scaffold_110_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31178..32020)
DNA (843bp) protein (281aa)
putative beta-glucanase (EC:3.2.1.73)
Glycosyl hydrolase family 16 n=2 Tax=Bacteroides caccae RepID=A5ZIF0_9BACE
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:EDM20505.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_026_092G1_scaffold_110_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32222..33046)
DNA (825bp) protein (275aa)
Glycosyl hydrolase family 16 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZIE9_9BACE
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:EDM20504.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative endo-beta-galactosidase
L2_026_092G1_scaffold_110_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33167..34744)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8URS8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74162.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative outer membrane protein
L2_026_092G1_scaffold_110_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34786..38031)
DNA (3246bp) protein (1082aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAJ2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16889.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative outer membrane protein
Displaying items 1-30 of 67 in total

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